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Items: 1 to 20 of 98

1.

Conformational changes of the phenyl and naphthyl isocyanate-DNA adducts during DNA replication and by minor groove binding molecules.

Nakano S, Uotani Y, Sato Y, Oka H, Fujii M, Sugimoto N.

Nucleic Acids Res. 2013 Oct;41(18):8581-90. doi: 10.1093/nar/gkt608. Epub 2013 Jul 19.

2.

The base-pairing ability of the base pair-mimic nucleosides.

Nakano S, Uenishi K, Fujii M, Sugimoto N.

Nucleic Acids Symp Ser (Oxf). 2007;(51):71-2.

PMID:
18029591
3.

Nuclear magnetic resonance solution structure of an N(2)-guanine DNA adduct derived from the potent tumorigen dibenzo[a,l]pyrene: intercalation from the minor groove with ruptured Watson-Crick base pairing.

Tang Y, Liu Z, Ding S, Lin CH, Cai Y, Rodriguez FA, Sayer JM, Jerina DM, Amin S, Broyde S, Geacintov NE.

Biochemistry. 2012 Dec 4;51(48):9751-62. doi: 10.1021/bi3013577. Epub 2012 Nov 15.

5.

Effect of Watson-Crick and Hoogsteen base pairing on the conformational stability of C8-phenoxyl-2'-deoxyguanosine adducts.

Millen AL, Churchill CD, Manderville RA, Wetmore SD.

J Phys Chem B. 2010 Oct 14;114(40):12995-3004. doi: 10.1021/jp105817p.

PMID:
20853889
6.
7.

Configurational entropy change of netropsin and distamycin upon DNA minor-groove binding.

Dolenc J, Baron R, Oostenbrink C, Koller J, van Gunsteren WF.

Biophys J. 2006 Aug 15;91(4):1460-70. Epub 2006 May 26.

9.

Base-pairing selectivity of a ureido-linked phenyl-2'-deoxycytidine derivative.

Nakano S, Oka H, Yamaguchi D, Fujii M, Sugimoto N.

Org Biomol Chem. 2012 Dec 28;10(48):9664-70. doi: 10.1039/c2ob26897c. Epub 2012 Nov 12.

PMID:
23147647
10.

Conformational analysis of site-specific DNA cross-links of cisplatin-distamycin conjugates.

Kostrhunova H, Brabec V.

Biochemistry. 2000 Oct 17;39(41):12639-49.

PMID:
11027144
11.
12.

Efficient and error-free replication past a minor-groove DNA adduct by the sequential action of human DNA polymerases iota and kappa.

Washington MT, Minko IG, Johnson RE, Wolfle WT, Harris TM, Lloyd RS, Prakash S, Prakash L.

Mol Cell Biol. 2004 Jul;24(13):5687-93.

13.
14.

Binding of two distamycin A molecules in the minor groove of an alternating B-DNA duplex.

Chen X, Ramakrishnan B, Rao ST, Sundaralingam M.

Nat Struct Biol. 1994 Mar;1(3):169-75.

PMID:
7656035
15.

Solution structure of a cis-opened (10R)-N6-deoxyadenosine adduct of (9S,10R)-9,10-epoxy-7,8,9,10-tetrahydrobenzo[a]pyrene in a DNA duplex.

Volk DE, Thiviyanathan V, Rice JS, Luxon BA, Shah JH, Yagi H, Sayer JM, Yeh HJ, Jerina DM, Gorenstein DG.

Biochemistry. 2003 Feb 18;42(6):1410-20.

PMID:
12578353
17.

Molecular modelling of the interaction of carbocyclic analogues of netropsin and distamycin with d(CGCGAATTCGCG)2.

Bielawski K, Bielawska A, Bartulewicz D, Rózański A.

Acta Biochim Pol. 2000;47(3):855-66.

18.

Defining GC-specificity in the minor groove: side-by-side binding of the di-imidazole lexitropsin to C-A-T-G-G-C-C-A-T-G.

Kopka ML, Goodsell DS, Han GW, Chiu TK, Lown JW, Dickerson RE.

Structure. 1997 Aug 15;5(8):1033-46.

20.

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