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Items: 1 to 20 of 140

1.

Contrasted evolutionary constraints on secreted and non-secreted proteomes of selected Actinobacteria.

Thakur S, Normand P, Daubin V, Tisa LS, Sen A.

BMC Genomics. 2013 Jul 13;14:474. doi: 10.1186/1471-2164-14-474.

2.

Comparative secretome analysis suggests low plant cell wall degrading capacity in Frankia symbionts.

Mastronunzio JE, Tisa LS, Normand P, Benson DR.

BMC Genomics. 2008 Jan 28;9:47. doi: 10.1186/1471-2164-9-47.

3.

The implication of life style on codon usage patterns and predicted highly expressed genes for three Frankia genomes.

Sen A, Sur S, Bothra AK, Benson DR, Normand P, Tisa LS.

Antonie Van Leeuwenhoek. 2008 May;93(4):335-46. doi: 10.1007/s10482-007-9211-1. Epub 2008 Feb 22.

PMID:
18293096
4.

Different dynamics of genome content shuffling among host-specificity groups of the symbiotic actinobacterium Frankia.

Kucho K, Yamanaka T, Sasakawa H, Mansour SR, Uchiumi T.

BMC Genomics. 2014 Jul 19;15:609. doi: 10.1186/1471-2164-15-609.

5.

The rapid evolution of signal peptides is mainly caused by relaxed selection on non-synonymous and synonymous sites.

Li YD, Xie ZY, Du YL, Zhou Z, Mao XM, Lv LX, Li YQ.

Gene. 2009 May 1;436(1-2):8-11. doi: 10.1016/j.gene.2009.01.015. Epub 2009 Feb 7.

PMID:
19393172
6.

Genome characteristics of facultatively symbiotic Frankia sp. strains reflect host range and host plant biogeography.

Normand P, Lapierre P, Tisa LS, Gogarten JP, Alloisio N, Bagnarol E, Bassi CA, Berry AM, Bickhart DM, Choisne N, Couloux A, Cournoyer B, Cruveiller S, Daubin V, Demange N, Francino MP, Goltsman E, Huang Y, Kopp OR, Labarre L, Lapidus A, Lavire C, Marechal J, Martinez M, Mastronunzio JE, Mullin BC, Niemann J, Pujic P, Rawnsley T, Rouy Z, Schenowitz C, Sellstedt A, Tavares F, Tomkins JP, Vallenet D, Valverde C, Wall LG, Wang Y, Medigue C, Benson DR.

Genome Res. 2007 Jan;17(1):7-15. Epub 2006 Dec 6.

7.
8.

Aspects of nitrogen-fixing Actinobacteria, in particular free-living and symbiotic Frankia.

Sellstedt A, Richau KH.

FEMS Microbiol Lett. 2013 May;342(2):179-86. doi: 10.1111/1574-6968.12116. Epub 2013 Mar 28. Review.

9.

Differential genome evolution between companion symbionts in an insect-bacterial symbiosis.

Bennett GM, McCutcheon JP, MacDonald BR, Romanovicz D, Moran NA.

MBio. 2014 Sep 30;5(5):e01697-14. doi: 10.1128/mBio.01697-14.

10.

Purifying selection in mitochondria, free-living and obligate intracellular proteobacteria.

Mamirova L, Popadin K, Gelfand MS.

BMC Evol Biol. 2007 Feb 12;7:17.

11.

Comparative analysis of secreted protein evolution using expressed sequence tags from four poplar leaf rusts (Melampsora spp.).

Joly DL, Feau N, Tanguay P, Hamelin RC.

BMC Genomics. 2010 Jul 8;11:422. doi: 10.1186/1471-2164-11-422.

12.

Identification of TTA codon containing genes in Frankia and exploration of the role of tRNA in regulating these genes.

Sen A, Thakur S, Bothra AK, Sur S, Tisa LS.

Arch Microbiol. 2012 Jan;194(1):35-45. doi: 10.1007/s00203-011-0731-8. Epub 2011 Jul 20.

PMID:
21773800
13.

Cultivation reveals physiological diversity among defensive 'Streptomyces philanthi' symbionts of beewolf digger wasps (Hymenoptera, Crabronidae).

Nechitaylo TY, Westermann M, Kaltenpoth M.

BMC Microbiol. 2014 Jul 29;14:202. doi: 10.1186/s12866-014-0202-x.

14.

What stories can the Frankia genomes start to tell us?

Tisa LS, Beauchemin N, Gtari M, Sen A, Wall LG.

J Biosci. 2013 Nov;38(4):719-26.

15.

Purifying selection and molecular adaptation in the genome of Verminephrobacter, the heritable symbiotic bacteria of earthworms.

Kjeldsen KU, Bataillon T, Pinel N, De Mita S, Lund MB, Panitz F, Bendixen C, Stahl DA, Schramm A.

Genome Biol Evol. 2012;4(3):307-15. doi: 10.1093/gbe/evs014. Epub 2012 Feb 14.

16.

Comparative molecular evolution of primary (Buchnera) and secondary symbionts of aphids based on two protein-coding genes.

Moya A, Latorre A, Sabater-Muñoz B, Silva FJ.

J Mol Evol. 2002 Aug;55(2):127-37.

PMID:
12107590
17.

Diminished exoproteome of Frankia spp. in culture and symbiosis.

Mastronunzio JE, Huang Y, Benson DR.

Appl Environ Microbiol. 2009 Nov;75(21):6721-8. doi: 10.1128/AEM.01559-09. Epub 2009 Sep 11.

18.

Compositions of fungal secretomes indicate a greater impact of phylogenetic history than lifestyle adaptation.

Krijger JJ, Thon MR, Deising HB, Wirsel SG.

BMC Genomics. 2014 Aug 27;15:722. doi: 10.1186/1471-2164-15-722.

19.

Discaria trinervis - Frankia symbiosis promotion by saprophytic actinomycetes.

Solans M.

J Basic Microbiol. 2007 Jun;47(3):243-50.

PMID:
17518417
20.

Evolution of High Cellulolytic Activity in Symbiotic Streptomyces through Selection of Expanded Gene Content and Coordinated Gene Expression.

Book AJ, Lewin GR, McDonald BR, Takasuka TE, Wendt-Pienkowski E, Doering DT, Suh S, Raffa KF, Fox BG, Currie CR.

PLoS Biol. 2016 Jun 8;14(6):e1002475. doi: 10.1371/journal.pbio.1002475. eCollection 2016 Jun.

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