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Items: 1 to 20 of 102

1.

A morphogenetic survey on ciliate plankton from a mountain lake pinpoints the necessity of lineage-specific barcode markers in microbial ecology.

Stoeck T, Breiner HW, Filker S, Ostermaier V, Kammerlander B, Sonntag B.

Environ Microbiol. 2014 Feb;16(2):430-44. doi: 10.1111/1462-2920.12194. Epub 2013 Jul 15.

2.

Evidence for isolated evolution of deep-sea ciliate communities through geological separation and environmental selection.

Stock A, Edgcomb V, Orsi W, Filker S, Breiner HW, Yakimov MM, Stoeck T.

BMC Microbiol. 2013 Jul 8;13:150. doi: 10.1186/1471-2180-13-150.

3.

Microbial eukaryote plankton communities of high-mountain lakes from three continents exhibit strong biogeographic patterns.

Filker S, Sommaruga R, Vila I, Stoeck T.

Mol Ecol. 2016 May;25(10):2286-301. doi: 10.1111/mec.13633. Epub 2016 May 14.

4.

Phylogeny of intestinal ciliates, including Charonina ventriculi, and comparison of microscopy and 18S rRNA gene pyrosequencing for rumen ciliate community structure analysis.

Kittelmann S, Devente SR, Kirk MR, Seedorf H, Dehority BA, Janssen PH.

Appl Environ Microbiol. 2015 Apr;81(7):2433-44. doi: 10.1128/AEM.03697-14. Epub 2015 Jan 23.

5.
6.

Utility of genetic markers and morphology for species discrimination within the order Tintinnida (Ciliophora, Spirotrichea).

Santoferrara LF, McManus GB, Alder VA.

Protist. 2013 Jan;164(1):24-36. doi: 10.1016/j.protis.2011.12.002. Epub 2012 Jan 20.

PMID:
22264493
7.

Accuracy of protist diversity assessments: morphology compared with cloning and direct pyrosequencing of 18S rRNA genes and ITS regions using the conspicuous tintinnid ciliates as a case study.

Bachy C, Dolan JR, López-García P, Deschamps P, Moreira D.

ISME J. 2013 Feb;7(2):244-55. doi: 10.1038/ismej.2012.106. Epub 2012 Oct 4.

8.
9.

Diversity of oligotrichia and choreotrichia ciliates in coastal marine sediments and in overlying plankton.

Doherty M, Tamura M, Vriezen JA, McManus GB, Katz LA.

Appl Environ Microbiol. 2010 Jun;76(12):3924-35. doi: 10.1128/AEM.01604-09. Epub 2010 Apr 30.

10.

High diversity of protistan plankton communities in remote high mountain lakes in the European Alps and the Himalayan mountains.

Kammerlander B, Breiner HW, Filker S, Sommaruga R, Sonntag B, Stoeck T.

FEMS Microbiol Ecol. 2015 Apr;91(4). pii: fiv010. doi: 10.1093/femsec/fiv010. Epub 2015 Jan 27.

11.

Application of combined morphological-molecular approaches to the identification of planktonic protists from environmental samples.

Duff RJ, Ball H, Lavrentyev PJ.

J Eukaryot Microbiol. 2008 Jul-Aug;55(4):306-12. doi: 10.1111/j.1550-7408.2008.00328.x.

PMID:
18681844
12.
13.

High protists diversity in the plankton of sulfurous lakes and lagoons examined by 18s rRNA gene sequence analyses.

Triadó-Margarit X, Casamayor EO.

Environ Microbiol Rep. 2015 Dec;7(6):908-17. doi: 10.1111/1758-2229.12324. Epub 2015 Aug 27.

PMID:
26224512
14.

Molecular characterization of ciliate diversity in stream biofilms.

Dopheide A, Lear G, Stott R, Lewis G.

Appl Environ Microbiol. 2008 Mar;74(6):1740-7. doi: 10.1128/AEM.01438-07. Epub 2008 Jan 25.

15.

Is Planktonic Diversity Well Recorded in Sedimentary DNA? Toward the Reconstruction of Past Protistan Diversity.

Capo E, Debroas D, Arnaud F, Domaizon I.

Microb Ecol. 2015 Nov;70(4):865-75. doi: 10.1007/s00248-015-0627-2. Epub 2015 May 29.

PMID:
26022714
16.

High genetic diversity and novelty in eukaryotic plankton assemblages inhabiting saline lakes in the Qaidam basin.

Wang J, Wang F, Chu L, Wang H, Zhong Z, Liu Z, Gao J, Duan H.

PLoS One. 2014 Nov 17;9(11):e112812. doi: 10.1371/journal.pone.0112812. eCollection 2014.

17.

Strengths and Biases of High-Throughput Sequencing Data in the Characterization of Freshwater Ciliate Microbiomes.

Boscaro V, Rossi A, Vannini C, Verni F, Fokin SI, Petroni G.

Microb Ecol. 2017 May;73(4):865-875. doi: 10.1007/s00248-016-0912-8. Epub 2016 Dec 28.

PMID:
28032127
18.

Molecular Phylogeny of Mobilid and Sessilid Ciliates Symbiotic in Eastern Pacific Limpets (Mollusca: Patellogastropoda).

Irwin NA, Lynn DH.

J Eukaryot Microbiol. 2015 Jul-Aug;62(4):543-52. doi: 10.1111/jeu.12208. Epub 2015 Mar 20.

PMID:
25711931
19.

The systematic position of Paraspathidium Noland, 1937 (Ciliophora, Litostomatea?) inferred from primary SSU rRNA gene sequences and predicted secondary rRNA structure.

Zhang Q, Yi Z, Song W, Al-Rasheid KA, Warren A.

Eur J Protistol. 2010 Nov;46(4):280-8. doi: 10.1016/j.ejop.2010.05.001.

PMID:
20889318
20.

Ciliate diversity, community structure, and novel taxa in lakes of the McMurdo Dry Valleys, Antarctica.

Xu Y, Vick-Majors T, Morgan-Kiss R, Priscu JC, Amaral-Zettler L.

Biol Bull. 2014 Oct;227(2):175-90.

PMID:
25411375

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