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T2D@ZJU: a knowledgebase integrating heterogeneous connections associated with type 2 diabetes mellitus.

Yang Z, Yang J, Liu W, Wu L, Xing L, Wang Y, Fan X, Cheng Y.

Database (Oxford). 2013 Jul 11;2013:bat052. doi: 10.1093/database/bat052. Print 2013.


CHD@ZJU: a knowledgebase providing network-based research platform on coronary heart disease.

Wu L, Li X, Yang J, Liu Y, Fan X, Cheng Y.

Database (Oxford). 2013 Jul 1;2013:bat047. doi: 10.1093/database/bat047. Print 2013.


Exploring the pathogenetic association between schizophrenia and type 2 diabetes mellitus diseases based on pathway analysis.

Liu Y, Li Z, Zhang M, Deng Y, Yi Z, Shi T.

BMC Med Genomics. 2013;6 Suppl 1:S17. doi: 10.1186/1755-8794-6-S1-S17. Epub 2013 Jan 23.


PAIR: the predicted Arabidopsis interactome resource.

Lin M, Shen X, Chen X.

Nucleic Acids Res. 2011 Jan;39(Database issue):D1134-40. doi: 10.1093/nar/gkq938. Epub 2010 Oct 15.


DAVID Knowledgebase: a gene-centered database integrating heterogeneous gene annotation resources to facilitate high-throughput gene functional analysis.

Sherman BT, Huang da W, Tan Q, Guo Y, Bour S, Liu D, Stephens R, Baseler MW, Lane HC, Lempicki RA.

BMC Bioinformatics. 2007 Nov 2;8:426.


MyBioNet: interactively visualize, edit and merge biological networks on the web.

Huang D, Huang Y, Bai Y, Chen D, Hofestädt R, Klukas C, Chen M.

Bioinformatics. 2011 Dec 1;27(23):3321-2. doi: 10.1093/bioinformatics/btr557. Epub 2011 Oct 7.


MGDB: a comprehensive database of genes involved in melanoma.

Zhang D, Zhu R, Zhang H, Zheng CH, Xia J.

Database (Oxford). 2015 Sep 30;2015. pii: bav097. doi: 10.1093/database/bav097. Print 2015.


T2D-Db: an integrated platform to study the molecular basis of Type 2 diabetes.

Agrawal S, Dimitrova N, Nathan P, Udayakumar K, Lakshmi SS, Sriram S, Manjusha N, Sengupta U.

BMC Genomics. 2008 Jul 7;9:320. doi: 10.1186/1471-2164-9-320.


The ConsensusPathDB interaction database: 2013 update.

Kamburov A, Stelzl U, Lehrach H, Herwig R.

Nucleic Acids Res. 2013 Jan;41(Database issue):D793-800. doi: 10.1093/nar/gks1055. Epub 2012 Nov 11.


Defensins knowledgebase: a manually curated database and information source focused on the defensins family of antimicrobial peptides.

Seebah S, Suresh A, Zhuo S, Choong YH, Chua H, Chuon D, Beuerman R, Verma C.

Nucleic Acids Res. 2007 Jan;35(Database issue):D265-8. Epub 2006 Nov 7.


RASOnD-a comprehensive resource and search tool for RAS superfamily oncogenes from various species.

Kulsum U, Singh V, Sharma S, Srinivasan A, Singh TP, Kaur P.

BMC Genomics. 2011 Jul 5;12:341. doi: 10.1186/1471-2164-12-341.


Genome-wide meta-analysis of genetic susceptible genes for Type 2 Diabetes.

Hale PJ, López-Yunez AM, Chen JY.

BMC Syst Biol. 2012;6 Suppl 3:S16. doi: 10.1186/1752-0509-6-S3-S16. Epub 2012 Dec 17.


VistaClara: an expression browser plug-in for Cytoscape.

Kincaid R, Kuchinsky A, Creech M.

Bioinformatics. 2008 Sep 15;24(18):2112-4. doi: 10.1093/bioinformatics/btn368. Epub 2008 Aug 4.


ConsensusPathDB--a database for integrating human functional interaction networks.

Kamburov A, Wierling C, Lehrach H, Herwig R.

Nucleic Acids Res. 2009 Jan;37(Database issue):D623-8. doi: 10.1093/nar/gkn698. Epub 2008 Oct 21.


PPLook: an automated data mining tool for protein-protein interaction.

Zhang SW, Li YJ, Xia L, Pan Q.

BMC Bioinformatics. 2010 Jun 16;11:326. doi: 10.1186/1471-2105-11-326.


TRIP database 2.0: a manually curated information hub for accessing TRP channel interaction network.

Shin YC, Shin SY, Chun JN, Cho HS, Lim JM, Kim HG, So I, Kwon D, Jeon JH.

PLoS One. 2012;7(10):e47165. doi: 10.1371/journal.pone.0047165. Epub 2012 Oct 11.


PlantNATsDB: a comprehensive database of plant natural antisense transcripts.

Chen D, Yuan C, Zhang J, Zhang Z, Bai L, Meng Y, Chen LL, Chen M.

Nucleic Acids Res. 2012 Jan;40(Database issue):D1187-93. doi: 10.1093/nar/gkr823. Epub 2011 Nov 3.


A database and tool, IM Browser, for exploring and integrating emerging gene and protein interaction data for Drosophila.

Pacifico S, Liu G, Guest S, Parrish JR, Fotouhi F, Finley RL Jr.

BMC Bioinformatics. 2006 Apr 7;7:195.


HIstome--a relational knowledgebase of human histone proteins and histone modifying enzymes.

Khare SP, Habib F, Sharma R, Gadewal N, Gupta S, Galande S.

Nucleic Acids Res. 2012 Jan;40(Database issue):D337-42. doi: 10.1093/nar/gkr1125. Epub 2011 Dec 2.


BioSuper: a web tool for the superimposition of biomolecules and assemblies with rotational symmetry.

Rueda M, Orozco M, Totrov M, Abagyan R.

BMC Struct Biol. 2013 Dec 13;13:32. doi: 10.1186/1472-6807-13-32.

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