Sort by

Send to

Choose Destination

Links from PubMed

Items: 1 to 20 of 133


Unusual base pairing during the decoding of a stop codon by the ribosome.

Fernández IS, Ng CL, Kelley AC, Wu G, Yu YT, Ramakrishnan V.

Nature. 2013 Aug 1;500(7460):107-10. doi: 10.1038/nature12302. Epub 2013 Jun 30.


A new understanding of the decoding principle on the ribosome.

Demeshkina N, Jenner L, Westhof E, Yusupov M, Yusupova G.

Nature. 2012 Mar 21;484(7393):256-9. doi: 10.1038/nature10913.


Structure of a purine-purine wobble base pair in the decoding center of the ribosome.

Murphy FV 4th, Ramakrishnan V.

Nat Struct Mol Biol. 2004 Dec;11(12):1251-2. Epub 2004 Nov 21.


Rationalization and prediction of selective decoding of pseudouridine-modified nonsense and sense codons.

Parisien M, Yi C, Pan T.

RNA. 2012 Mar;18(3):355-67. doi: 10.1261/rna.031351.111. Epub 2012 Jan 26.


Modified uridines with C5-methylene substituents at the first position of the tRNA anticodon stabilize U.G wobble pairing during decoding.

Kurata S, Weixlbaumer A, Ohtsuki T, Shimazaki T, Wada T, Kirino Y, Takai K, Watanabe K, Ramakrishnan V, Suzuki T.

J Biol Chem. 2008 Jul 4;283(27):18801-11. doi: 10.1074/jbc.M800233200. Epub 2008 May 2.


Principles of stop-codon reading on the ribosome.

Sund J, Andér M, Aqvist J.

Nature. 2010 Jun 17;465(7300):947-50. doi: 10.1038/nature09082. Epub 2010 May 30.


Structural basis for stop codon recognition in eukaryotes.

Brown A, Shao S, Murray J, Hegde RS, Ramakrishnan V.

Nature. 2015 Aug 27;524(7566):493-6. doi: 10.1038/nature14896. Epub 2015 Aug 5.


Human tRNA(Lys3)(UUU) is pre-structured by natural modifications for cognate and wobble codon binding through keto-enol tautomerism.

Vendeix FA, Murphy FV 4th, Cantara WA, Leszczyńska G, Gustilo EM, Sproat B, Malkiewicz A, Agris PF.

J Mol Biol. 2012 Mar 2;416(4):467-85. doi: 10.1016/j.jmb.2011.12.048. Epub 2011 Dec 29.


Three distinct peptides from the N domain of translation termination factor eRF1 surround stop codon in the ribosome.

Bulygin KN, Khairulina YS, Kolosov PM, Ven'yaminova AG, Graifer DM, Vorobjev YN, Frolova LY, Kisselev LL, Karpova GG.

RNA. 2010 Oct;16(10):1902-14. doi: 10.1261/rna.2066910. Epub 2010 Aug 5.


tRNA's wobble decoding of the genome: 40 years of modification.

Agris PF, Vendeix FA, Graham WD.

J Mol Biol. 2007 Feb 9;366(1):1-13. Epub 2006 Nov 15. Review.


Mechanism for expanding the decoding capacity of transfer RNAs by modification of uridines.

Weixlbaumer A, Murphy FV 4th, Dziergowska A, Malkiewicz A, Vendeix FA, Agris PF, Ramakrishnan V.

Nat Struct Mol Biol. 2007 Jun;14(6):498-502. Epub 2007 May 13.


Structures of tRNAs with an expanded anticodon loop in the decoding center of the 30S ribosomal subunit.

Dunham CM, Selmer M, Phelps SS, Kelley AC, Suzuki T, Joseph S, Ramakrishnan V.

RNA. 2007 Jun;13(6):817-23. Epub 2007 Apr 6.


Selection of tRNA by the ribosome requires a transition from an open to a closed form.

Ogle JM, Murphy FV, Tarry MJ, Ramakrishnan V.

Cell. 2002 Nov 27;111(5):721-32.


Analysis of the roles of tRNA structure, ribosomal protein L9, and the bacteriophage T4 gene 60 bypassing signals during ribosome slippage on mRNA.

Herr AJ, Nelson CC, Wills NM, Gesteland RF, Atkins JF.

J Mol Biol. 2001 Jun 22;309(5):1029-48.


Recognition of cognate transfer RNA by the 30S ribosomal subunit.

Ogle JM, Brodersen DE, Clemons WM Jr, Tarry MJ, Carter AP, Ramakrishnan V.

Science. 2001 May 4;292(5518):897-902.


Decoding in the absence of a codon by tmRNA and SmpB in the ribosome.

Neubauer C, Gillet R, Kelley AC, Ramakrishnan V.

Science. 2012 Mar 16;335(6074):1366-9. doi: 10.1126/science.1217039.


Wobble during decoding: more than third-position promiscuity.

Cochella L, Green R.

Nat Struct Mol Biol. 2004 Dec;11(12):1160-2. No abstract available.


Stop codons and UGG promote efficient binding of the polypeptide release factor eRF1 to the ribosomal A site.

Chavatte L, Frolova L, Laugâa P, Kisselev L, Favre A.

J Mol Biol. 2003 Aug 22;331(4):745-58.


New structural insights into the decoding mechanism: translation infidelity via a G·U pair with Watson-Crick geometry.

Demeshkina N, Jenner L, Westhof E, Yusupov M, Yusupova G.

FEBS Lett. 2013 Jun 27;587(13):1848-57. doi: 10.1016/j.febslet.2013.05.009. Epub 2013 May 23. Review.

Items per page

Supplemental Content

Support Center