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Genetic variation and HIV-associated neurologic disease.

Dahiya S, Irish BP, Nonnemacher MR, Wigdahl B.

Adv Virus Res. 2013;87:183-240. doi: 10.1016/B978-0-12-407698-3.00006-5. Review.


Development of co-selected single nucleotide polymorphisms in the viral promoter precedes the onset of human immunodeficiency virus type 1-associated neurocognitive impairment.

Li L, Aiamkitsumrit B, Pirrone V, Nonnemacher MR, Wojno A, Passic S, Flaig K, Kilareski E, Blakey B, Ku J, Parikh N, Shah R, Martin-Garcia J, Moldover B, Servance L, Downie D, Lewis S, Jacobson JM, Kolson D, Wigdahl B.

J Neurovirol. 2011 Feb;17(1):92-109. doi: 10.1007/s13365-010-0014-1. Epub 2011 Jan 12.


Genetic and functional heterogeneity of CNS-derived tat alleles from patients with HIV-associated dementia.

Cowley D, Gray LR, Wesselingh SL, Gorry PR, Churchill MJ.

J Neurovirol. 2011 Feb;17(1):70-81. doi: 10.1007/s13365-010-0002-5. Epub 2010 Nov 30.


Compartmentalized human immunodeficiency virus type 1 originates from long-lived cells in some subjects with HIV-1-associated dementia.

Schnell G, Spudich S, Harrington P, Price RW, Swanstrom R.

PLoS Pathog. 2009 Apr;5(4):e1000395. doi: 10.1371/journal.ppat.1000395. Epub 2009 Apr 24.


Genetic attributes of blood-derived subtype-C HIV-1 tat and env in India and neurocognitive function.

Tilghman MW, Bhattacharya J, Deshpande S, Ghate M, Espitia S, Grant I, Marcotte TD, Smith D, Mehendale S.

J Med Virol. 2014 Jan;86(1):88-96. doi: 10.1002/jmv.23816. Epub 2013 Oct 22.


Molecular pathway involved in HIV-1-induced CNS pathology: role of viral regulatory protein, Tat.

Rappaport J, Joseph J, Croul S, Alexander G, Del Valle L, Amini S, Khalili K.

J Leukoc Biol. 1999 Apr;65(4):458-65. Review.


HIV-1-related central nervous system disease: current issues in pathogenesis, diagnosis, and treatment.

Spudich S, González-Scarano F.

Cold Spring Harb Perspect Med. 2012 Jun;2(6):a007120. doi: 10.1101/cshperspect.a007120. Review.


Monocyte/macrophages and their role in HIV neuropathogenesis.

Burdo TH, Lackner A, Williams KC.

Immunol Rev. 2013 Jul;254(1):102-13. doi: 10.1111/imr.12068. Review.


HIV subtype D is associated with dementia, compared with subtype A, in immunosuppressed individuals at risk of cognitive impairment in Kampala, Uganda.

Sacktor N, Nakasujja N, Skolasky RL, Rezapour M, Robertson K, Musisi S, Katabira E, Ronald A, Clifford DB, Laeyendecker O, Quinn TC.

Clin Infect Dis. 2009 Sep 1;49(5):780-6. doi: 10.1086/605284.


[Analysis of genetic diversity and amino acid sequence of HIV-1tat in CNS and peripheral tissue of a patient with ADC and a patient with non-ADC].

Pu SS, Li YP, Yan YF, Wen HL, Wang ZY, Song YY, Xu HZ, Zhao L.

Zhonghua Shi Yan He Lin Chuang Bing Du Xue Za Zhi. 2011 Aug;25(4):251-3. Chinese.


Global HIV-1 molecular epidemiology with special reference to genetic analysis of HIV-1 subtypes circulating in North India: functional and pathogenic implications of genetic variation.

Neogi U, Sood V, Banerjee S, Ghosh N, Verma S, Samrat S, Sharma Y, Saxena A, Husain S, Ramachandran VG, Das S, Sreedhar KV, Goel N, Wanchu A, Banerjea AC.

Indian J Exp Biol. 2009 Jun;47(6):424-31. Review.


Evolving paradigms in the pathogenesis of HIV-1-associated dementia.

Fischer-Smith T, Rappaport J.

Expert Rev Mol Med. 2005 Dec 2;7(27):1-26. Review.


Low blood CD8+ T-lymphocytes and high circulating monocytes are predictors of HIV-1-associated progressive encephalopathy in children.

Sánchez-Ramón S, Bellón JM, Resino S, Cantó-Nogués C, Gurbindo D, Ramos JT, Muñoz-Fernández MA.

Pediatrics. 2003 Feb;111(2):E168-75.


Detection of the human immunodeficiency virus regulatory protein tat in CNS tissues.

Hudson L, Liu J, Nath A, Jones M, Raghavan R, Narayan O, Male D, Everall I.

J Neurovirol. 2000 Apr;6(2):145-55.


Alarmins and central nervous system inflammation in HIV-associated neurological disorders.

Gougeon ML.

J Intern Med. 2017 May;281(5):433-447. doi: 10.1111/joim.12570. Epub 2016 Nov 16. Review.


Analysis of the HIV-1 LTR NF-kappaB-proximal Sp site III: evidence for cell type-specific gene regulation and viral replication.

McAllister JJ, Phillips D, Millhouse S, Conner J, Hogan T, Ross HL, Wigdahl B.

Virology. 2000 Sep 1;274(2):262-77.


Genetic architecture of HIV-1 genes circulating in north India & their functional implications.

Neogi U, Sood V, Ronsard L, Singh J, Lata S, Ramachandran VG, Das S, Wanchu A, Banerjea AC.

Indian J Med Res. 2011 Dec;134(6):769-78. doi: 10.4103/0971-5916.92624. Review.


Derivation and biological characterization of a molecular clone of SHIV(KU-2) that causes AIDS, neurological disease, and renal disease in rhesus macaques.

Liu ZQ, Muhkerjee S, Sahni M, McCormick-Davis C, Leung K, Li Z, Gattone VH 2nd, Tian C, Doms RW, Hoffman TL, Raghavan R, Narayan O, Stephens EB.

Virology. 1999 Aug 1;260(2):295-307.

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