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Items: 1 to 20 of 87

1.

Comparative transcriptomics reveals patterns of selection in domesticated and wild tomato.

Koenig D, Jiménez-Gómez JM, Kimura S, Fulop D, Chitwood DH, Headland LR, Kumar R, Covington MF, Devisetty UK, Tat AV, Tohge T, Bolger A, Schneeberger K, Ossowski S, Lanz C, Xiong G, Taylor-Teeples M, Brady SM, Pauly M, Weigel D, Usadel B, Fernie AR, Peng J, Sinha NR, Maloof JN.

Proc Natl Acad Sci U S A. 2013 Jul 9;110(28):E2655-62. doi: 10.1073/pnas.1309606110. Epub 2013 Jun 26.

2.

Transcriptome comparison reveals the patterns of selection in domesticated and wild ramie (Boehmeria nivea L. Gaud).

Liu T, Tang S, Zhu S, Tang Q, Zheng X.

Plant Mol Biol. 2014 Sep;86(1-2):85-92. doi: 10.1007/s11103-014-0214-9. Epub 2014 Jun 17.

PMID:
24934879
3.

Oligonucleotide array discovery of polymorphisms in cultivated tomato (Solanum lycopersicum L.) reveals patterns of SNP variation associated with breeding.

Sim SC, Robbins MD, Chilcott C, Zhu T, Francis DM.

BMC Genomics. 2009 Oct 9;10:466. doi: 10.1186/1471-2164-10-466.

4.

Gene expression in developing fibres of Upland cotton (Gossypium hirsutum L.) was massively altered by domestication.

Rapp RA, Haigler CH, Flagel L, Hovav RH, Udall JA, Wendel JF.

BMC Biol. 2010 Nov 15;8:139. doi: 10.1186/1741-7007-8-139.

5.

SNP genotyping reveals genetic diversity between cultivated landraces and contemporary varieties of tomato.

Corrado G, Piffanelli P, Caramante M, Coppola M, Rao R.

BMC Genomics. 2013 Nov 27;14:835. doi: 10.1186/1471-2164-14-835.

7.

Sequence evolution and expression regulation of stress-responsive genes in natural populations of wild tomato.

Fischer I, Steige KA, Stephan W, Mboup M.

PLoS One. 2013 Oct 18;8(10):e78182. doi: 10.1371/journal.pone.0078182. eCollection 2013.

8.

Comparative transcriptomic profiling of a salt-tolerant wild tomato species and a salt-sensitive tomato cultivar.

Sun W, Xu X, Zhu H, Liu A, Liu L, Li J, Hua X.

Plant Cell Physiol. 2010 Jun;51(6):997-1006. doi: 10.1093/pcp/pcq056. Epub 2010 Apr 21.

PMID:
20410049
9.

Sequence diversity in three tomato species: SNPs, markers, and molecular evolution.

Jiménez-Gómez JM, Maloof JN.

BMC Plant Biol. 2009 Jul 3;9:85. doi: 10.1186/1471-2229-9-85.

10.

The abiotic stress-responsive NAC-type transcription factor SlNAC4 regulates salt and drought tolerance and stress-related genes in tomato (Solanum lycopersicum).

Zhu M, Chen G, Zhang J, Zhang Y, Xie Q, Zhao Z, Pan Y, Hu Z.

Plant Cell Rep. 2014 Nov;33(11):1851-63. doi: 10.1007/s00299-014-1662-z. Epub 2014 Jul 26.

PMID:
25063324
11.

Exploring genetic variation in the tomato (Solanum section Lycopersicon) clade by whole-genome sequencing.

100 Tomato Genome Sequencing Consortium, Aflitos S, Schijlen E, de Jong H, de Ridder D, Smit S, Finkers R, Wang J, Zhang G, Li N, Mao L, Bakker F, Dirks R, Breit T, Gravendeel B, Huits H, Struss D, Swanson-Wagner R, van Leeuwen H, van Ham RC, Fito L, Guignier L, Sevilla M, Ellul P, Ganko E, Kapur A, Reclus E, de Geus B, van de Geest H, Te Lintel Hekkert B, van Haarst J, Smits L, Koops A, Sanchez-Perez G, van Heusden AW, Visser R, Quan Z, Min J, Liao L, Wang X, Wang G, Yue Z, Yang X, Xu N, Schranz E, Smets E, Vos R, Rauwerda J, Ursem R, Schuit C, Kerns M, van den Berg J, Vriezen W, Janssen A, Datema E, Jahrman T, Moquet F, Bonnet J, Peters S.

Plant J. 2014 Oct;80(1):136-48. doi: 10.1111/tpj.12616. Epub 2014 Sep 3.

12.

Coevolution and hierarchical interactions of Tomato mosaic virus and the resistance gene Tm-1.

Ishibashi K, Mawatari N, Miyashita S, Kishino H, Meshi T, Ishikawa M.

PLoS Pathog. 2012;8(10):e1002975. doi: 10.1371/journal.ppat.1002975. Epub 2012 Oct 18.

13.

SlDREB2, a tomato dehydration-responsive element-binding 2 transcription factor, mediates salt stress tolerance in tomato and Arabidopsis.

Hichri I, Muhovski Y, Clippe A, Žižková E, Dobrev PI, Motyka V, Lutts S.

Plant Cell Environ. 2016 Jan;39(1):62-79. doi: 10.1111/pce.12591. Epub 2015 Aug 8.

PMID:
26082265
14.

Tomato yellow leaf curl Sardinia virus-resistant tomato plants expressing the multifunctional N-terminal domain of the replication-associated protein show transcriptional changes resembling stress-related responses.

Lucioli A, Berardi A, Gatti F, Tavazza R, Pizzichini D, Tavazza M.

Mol Plant Pathol. 2014 Jan;15(1):31-43. doi: 10.1111/mpp.12063. Epub 2013 Aug 4.

PMID:
23910556
15.

A clarified position for Solanum lycopersicum var. cerasiforme in the evolutionary history of tomatoes (solanaceae).

Ranc N, Muños S, Santoni S, Causse M.

BMC Plant Biol. 2008 Dec 20;8:130. doi: 10.1186/1471-2229-8-130.

16.

Systemin-dependent salinity tolerance in tomato: evidence of specific convergence of abiotic and biotic stress responses.

Orsini F, Cascone P, De Pascale S, Barbieri G, Corrado G, Rao R, Maggio A.

Physiol Plant. 2010 Jan;138(1):10-21. doi: 10.1111/j.1399-3054.2009.01292.x. Epub 2009 Sep 14.

PMID:
19843237
17.

Identification of malodorous, a wild species allele affecting tomato aroma that was aelected against during domestication.

Tadmor Y, Fridman E, Gur A, Larkov O, Lastochkin E, Ravid U, Zamir D, Lewinsohn E.

J Agric Food Chem. 2002 Mar 27;50(7):2005-9.

PMID:
11902948
18.

Whole transcriptome sequencing reveals genes involved in plastid/chloroplast division and development are regulated by the HP1/DDB1 at an early stage of tomato fruit development.

Tang X, Tang Z, Huang S, Liu J, Liu J, Shi W, Tian X, Li Y, Zhang D, Yang J, Gao Y, Zeng D, Hou P, Niu X, Cao Y, Li G, Li X, Xiao F, Liu Y.

Planta. 2013 Nov;238(5):923-36. doi: 10.1007/s00425-013-1942-9. Epub 2013 Aug 15.

PMID:
23948801
19.

SlDEAD31, a Putative DEAD-Box RNA Helicase Gene, Regulates Salt and Drought Tolerance and Stress-Related Genes in Tomato.

Zhu M, Chen G, Dong T, Wang L, Zhang J, Zhao Z, Hu Z.

PLoS One. 2015 Aug 4;10(8):e0133849. doi: 10.1371/journal.pone.0133849. eCollection 2015.

20.

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