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Items: 1 to 20 of 128

1.

A haplotype map of genomic variations and genome-wide association studies of agronomic traits in foxtail millet (Setaria italica).

Jia G, Huang X, Zhi H, Zhao Y, Zhao Q, Li W, Chai Y, Yang L, Liu K, Lu H, Zhu C, Lu Y, Zhou C, Fan D, Weng Q, Guo Y, Huang T, Zhang L, Lu T, Feng Q, Hao H, Liu H, Lu P, Zhang N, Li Y, Guo E, Wang S, Wang S, Liu J, Zhang W, Chen G, Zhang B, Li W, Wang Y, Li H, Zhao B, Li J, Diao X, Han B.

Nat Genet. 2013 Aug;45(8):957-61. doi: 10.1038/ng.2673. Epub 2013 Jun 23.

PMID:
23793027
2.

Population structure and association mapping of yield contributing agronomic traits in foxtail millet.

Gupta S, Kumari K, Muthamilarasan M, Parida SK, Prasad M.

Plant Cell Rep. 2014 Jun;33(6):881-93. doi: 10.1007/s00299-014-1564-0. Epub 2014 Jan 12.

PMID:
24413764
3.

Microsatellite Variations of Elite Setaria Varieties Released during Last Six Decades in China.

Jia G, Liu X, Schnable JC, Niu Z, Wang C, Li Y, Wang S, Wang S, Liu J, Guo E, Zhi H, Diao X.

PLoS One. 2015 May 1;10(5):e0125688. doi: 10.1371/journal.pone.0125688. eCollection 2015.

4.

Identifying the genome-wide sequence variations and developing new molecular markers for genetics research by re-sequencing a Landrace cultivar of foxtail millet.

Bai H, Cao Y, Quan J, Dong L, Li Z, Zhu Y, Zhu L, Dong Z, Li D.

PLoS One. 2013 Sep 10;8(9):e73514. doi: 10.1371/journal.pone.0073514. eCollection 2013.

5.

Foxtail millet: a model crop for genetic and genomic studies in bioenergy grasses.

Lata C, Gupta S, Prasad M.

Crit Rev Biotechnol. 2013 Sep;33(3):328-43. doi: 10.3109/07388551.2012.716809. Epub 2012 Sep 18. Review.

PMID:
22985089
6.

Development of highly polymorphic simple sequence repeat markers using genome-wide microsatellite variant analysis in Foxtail millet [Setaria italica (L.) P. Beauv].

Zhang S, Tang C, Zhao Q, Li J, Yang L, Qie L, Fan X, Li L, Zhang N, Zhao M, Liu X, Chai Y, Zhang X, Wang H, Li Y, Li W, Zhi H, Jia G, Diao X.

BMC Genomics. 2014 Jan 28;15:78. doi: 10.1186/1471-2164-15-78.

7.

Mapping of quantitative trait locus (QTLs) that contribute to germination and early seedling drought tolerance in the interspecific cross Setaria italicaƗSetaria viridis.

Qie L, Jia G, Zhang W, Schnable J, Shang Z, Li W, Liu B, Li M, Chai Y, Zhi H, Diao X.

PLoS One. 2014 Jul 17;9(7):e101868. doi: 10.1371/journal.pone.0101868. eCollection 2014.

8.

Genome-wide development and use of microsatellite markers for large-scale genotyping applications in foxtail millet [Setaria italica (L.)].

Pandey G, Misra G, Kumari K, Gupta S, Parida SK, Chattopadhyay D, Prasad M.

DNA Res. 2013 Apr;20(2):197-207. doi: 10.1093/dnares/dst002. Epub 2013 Feb 3.

9.

Genetic structure of landraces in foxtail millet (Setaria italica (L.) P. Beauv.) revealed with transposon display and interpretation to crop evolution of foxtail millet.

Hirano R, Naito K, Fukunaga K, Watanabe KN, Ohsawa R, Kawase M.

Genome. 2011 Jun;54(6):498-506. doi: 10.1139/g11-015. Epub 2011 May 30.

PMID:
21623678
10.

Genome sequence of foxtail millet (Setaria italica) provides insights into grass evolution and biofuel potential.

Zhang G, Liu X, Quan Z, Cheng S, Xu X, Pan S, Xie M, Zeng P, Yue Z, Wang W, Tao Y, Bian C, Han C, Xia Q, Peng X, Cao R, Yang X, Zhan D, Hu J, Zhang Y, Li H, Li H, Li N, Wang J, Wang C, Wang R, Guo T, Cai Y, Liu C, Xiang H, Shi Q, Huang P, Chen Q, Li Y, Wang J, Zhao Z, Wang J.

Nat Biotechnol. 2012 May 13;30(6):549-54. doi: 10.1038/nbt.2195.

PMID:
22580950
11.

Population genetics of foxtail millet and its wild ancestor.

Wang C, Chen J, Zhi H, Yang L, Li W, Wang Y, Li H, Zhao B, Chen M, Diao X.

BMC Genet. 2010 Oct 11;11:90. doi: 10.1186/1471-2156-11-90.

12.

Genetic diversity and population structure of Chinese foxtail millet [Setaria italica (L.) Beauv.] landraces.

Wang C, Jia G, Zhi H, Niu Z, Chai Y, Li W, Wang Y, Li H, Lu P, Zhao B, Diao X.

G3 (Bethesda). 2012 Jul;2(7):769-77. doi: 10.1534/g3.112.002907. Epub 2012 Jul 1.

13.

Development and genetic mapping of SSR markers in foxtail millet [Setaria italica (L.) P. Beauv.].

Jia X, Zhang Z, Liu Y, Zhang C, Shi Y, Song Y, Wang T, Li Y.

Theor Appl Genet. 2009 Feb;118(4):821-9. doi: 10.1007/s00122-008-0942-9. Epub 2009 Jan 13.

PMID:
19139840
14.

Sequence-based novel genomic microsatellite markers for robust genotyping purposes in foxtail millet [Setaria italica (L.) P. Beauv].

Gupta S, Kumari K, Sahu PP, Vidapu S, Prasad M.

Plant Cell Rep. 2012 Feb;31(2):323-37. doi: 10.1007/s00299-011-1168-x. Epub 2011 Oct 13.

PMID:
21993813
15.

Molecular diversity and population structure of Chinese green foxtail [Setaria viridis (L.) Beauv.] revealed by microsatellite analysis.

Jia G, Shi S, Wang C, Niu Z, Chai Y, Zhi H, Diao X.

J Exp Bot. 2013 Sep;64(12):3645-56. doi: 10.1093/jxb/ert198.

16.

Advances in Setaria genomics for genetic improvement of cereals and bioenergy grasses.

Muthamilarasan M, Prasad M.

Theor Appl Genet. 2015 Jan;128(1):1-14. doi: 10.1007/s00122-014-2399-3. Epub 2014 Sep 20. Review.

PMID:
25239219
17.

Identification and molecular characterization of MYB Transcription Factor Superfamily in C4 model plant foxtail millet (Setaria italica L.).

Muthamilarasan M, Khandelwal R, Yadav CB, Bonthala VS, Khan Y, Prasad M.

PLoS One. 2014 Oct 3;9(10):e109920. doi: 10.1371/journal.pone.0109920. eCollection 2014.

18.

Reference genome sequence of the model plant Setaria.

Bennetzen JL, Schmutz J, Wang H, Percifield R, Hawkins J, Pontaroli AC, Estep M, Feng L, Vaughn JN, Grimwood J, Jenkins J, Barry K, Lindquist E, Hellsten U, Deshpande S, Wang X, Wu X, Mitros T, Triplett J, Yang X, Ye CY, Mauro-Herrera M, Wang L, Li P, Sharma M, Sharma R, Ronald PC, Panaud O, Kellogg EA, Brutnell TP, Doust AN, Tuskan GA, Rokhsar D, Devos KM.

Nat Biotechnol. 2012 May 13;30(6):555-61. doi: 10.1038/nbt.2196.

19.

Allelic variation of the Waxy gene in foxtail millet [Setaria italica (L.) P. Beauv.] by single nucleotide polymorphisms.

Van K, Onoda S, Kim MY, Kim KD, Lee SH.

Mol Genet Genomics. 2008 Mar;279(3):255-66. Epub 2007 Dec 19.

PMID:
18157676
20.

A high density genetic map and QTL for agronomic and yield traits in Foxtail millet [Setaria italica (L.) P. Beauv].

Fang X, Dong K, Wang X, Liu T, He J, Ren R, Zhang L, Liu R, Liu X, Li M, Huang M, Zhang Z, Yang T.

BMC Genomics. 2016 May 4;17:336. doi: 10.1186/s12864-016-2628-z.

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