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Items: 1 to 20 of 139

1.

Inferring demographic history from a spectrum of shared haplotype lengths.

Harris K, Nielsen R.

PLoS Genet. 2013 Jun;9(6):e1003521. doi: 10.1371/journal.pgen.1003521. Epub 2013 Jun 6.

2.

Ancient structure in Africa unlikely to explain Neanderthal and non-African genetic similarity.

Yang MA, Malaspinas AS, Durand EY, Slatkin M.

Mol Biol Evol. 2012 Oct;29(10):2987-95. Epub 2012 Apr 18.

3.

Effect of ancient population structure on the degree of polymorphism shared between modern human populations and ancient hominins.

Eriksson A, Manica A.

Proc Natl Acad Sci U S A. 2012 Aug 28;109(35):13956-60. doi: 10.1073/pnas.1200567109. Epub 2012 Aug 14.

4.

Genetic evidence for archaic admixture in Africa.

Hammer MF, Woerner AE, Mendez FL, Watkins JC, Wall JD.

Proc Natl Acad Sci U S A. 2011 Sep 13;108(37):15123-8. doi: 10.1073/pnas.1109300108. Epub 2011 Sep 6.

5.

Indigenous Arabs are descendants of the earliest split from ancient Eurasian populations.

Rodriguez-Flores JL, Fakhro K, Agosto-Perez F, Ramstetter MD, Arbiza L, Vincent TL, Robay A, Malek JA, Suhre K, Chouchane L, Badii R, Al-Nabet Al-Marri A, Abi Khalil C, Zirie M, Jayyousi A, Salit J, Keinan A, Clark AG, Crystal RG, Mezey JG.

Genome Res. 2016 Feb;26(2):151-62. doi: 10.1101/gr.191478.115. Epub 2016 Jan 4.

6.

Higher levels of neanderthal ancestry in East Asians than in Europeans.

Wall JD, Yang MA, Jay F, Kim SK, Durand EY, Stevison LS, Gignoux C, Woerner A, Hammer MF, Slatkin M.

Genetics. 2013 May;194(1):199-209. doi: 10.1534/genetics.112.148213. Epub 2013 Feb 14.

7.

Gene flow from North Africa contributes to differential human genetic diversity in southern Europe.

Botigué LR, Henn BM, Gravel S, Maples BK, Gignoux CR, Corona E, Atzmon G, Burns E, Ostrer H, Flores C, Bertranpetit J, Comas D, Bustamante CD.

Proc Natl Acad Sci U S A. 2013 Jul 16;110(29):11791-6. doi: 10.1073/pnas.1306223110. Epub 2013 Jun 3.

8.

Genomic ancestry of North Africans supports back-to-Africa migrations.

Henn BM, Botigué LR, Gravel S, Wang W, Brisbin A, Byrnes JK, Fadhlaoui-Zid K, Zalloua PA, Moreno-Estrada A, Bertranpetit J, Bustamante CD, Comas D.

PLoS Genet. 2012 Jan;8(1):e1002397. doi: 10.1371/journal.pgen.1002397. Epub 2012 Jan 12.

9.

Complex history of admixture between modern humans and Neandertals.

Vernot B, Akey JM.

Am J Hum Genet. 2015 Mar 5;96(3):448-53. doi: 10.1016/j.ajhg.2015.01.006. Epub 2015 Feb 12.

10.

Ancestral components of admixed genomes in a Mexican cohort.

Johnson NA, Coram MA, Shriver MD, Romieu I, Barsh GS, London SJ, Tang H.

PLoS Genet. 2011 Dec;7(12):e1002410. doi: 10.1371/journal.pgen.1002410. Epub 2011 Dec 15.

11.

Demography and the age of rare variants.

Mathieson I, McVean G.

PLoS Genet. 2014 Aug 7;10(8):e1004528. doi: 10.1371/journal.pgen.1004528. eCollection 2014 Aug.

12.

Model-based analyses of whole-genome data reveal a complex evolutionary history involving archaic introgression in Central African Pygmies.

Hsieh P, Woerner AE, Wall JD, Lachance J, Tishkoff SA, Gutenkunst RN, Hammer MF.

Genome Res. 2016 Mar;26(3):291-300. doi: 10.1101/gr.196634.115. Epub 2016 Feb 17. Erratum in: Genome Res. 2016 May;26(5):717.1.

13.

Apparent variation in Neanderthal admixture among African populations is consistent with gene flow from Non-African populations.

Wang S, Lachance J, Tishkoff SA, Hey J, Xing J.

Genome Biol Evol. 2013;5(11):2075-81. doi: 10.1093/gbe/evt160.

14.

Balancing selection on a regulatory region exhibiting ancient variation that predates human-neandertal divergence.

Gokcumen O, Zhu Q, Mulder LC, Iskow RC, Austermann C, Scharer CD, Raj T, Boss JM, Sunyaev S, Price A, Stranger B, Simon V, Lee C.

PLoS Genet. 2013 Apr;9(4):e1003404. doi: 10.1371/journal.pgen.1003404. Epub 2013 Apr 11.

15.

Reconstructing the population genetic history of the Caribbean.

Moreno-Estrada A, Gravel S, Zakharia F, McCauley JL, Byrnes JK, Gignoux CR, Ortiz-Tello PA, Martínez RJ, Hedges DJ, Morris RW, Eng C, Sandoval K, Acevedo-Acevedo S, Norman PJ, Layrisse Z, Parham P, Martínez-Cruzado JC, Burchard EG, Cuccaro ML, Martin ER, Bustamante CD.

PLoS Genet. 2013 Nov;9(11):e1003925. doi: 10.1371/journal.pgen.1003925. Epub 2013 Nov 14.

16.

Inferring Recent Demography from Isolation by Distance of Long Shared Sequence Blocks.

Ringbauer H, Coop G, Barton NH.

Genetics. 2017 Mar;205(3):1335-1351. doi: 10.1534/genetics.116.196220. Epub 2017 Jan 20.

PMID:
28108588
17.

Human genetic data reveal contrasting demographic patterns between sedentary and nomadic populations that predate the emergence of farming.

Aimé C, Laval G, Patin E, Verdu P, Ségurel L, Chaix R, Hegay T, Quintana-Murci L, Heyer E, Austerlitz F.

Mol Biol Evol. 2013 Dec;30(12):2629-44. doi: 10.1093/molbev/mst156. Epub 2013 Sep 24.

PMID:
24063884
18.

North African populations carry the signature of admixture with Neandertals.

Sánchez-Quinto F, Botigué LR, Civit S, Arenas C, Avila-Arcos MC, Bustamante CD, Comas D, Lalueza-Fox C.

PLoS One. 2012;7(10):e47765. doi: 10.1371/journal.pone.0047765. Epub 2012 Oct 17.

19.

Neandertal admixture in Eurasia confirmed by maximum-likelihood analysis of three genomes.

Lohse K, Frantz LA.

Genetics. 2014 Apr;196(4):1241-51. doi: 10.1534/genetics.114.162396. Epub 2014 Feb 13.

20.

Estimating variable effective population sizes from multiple genomes: a sequentially markov conditional sampling distribution approach.

Sheehan S, Harris K, Song YS.

Genetics. 2013 Jul;194(3):647-62. doi: 10.1534/genetics.112.149096. Epub 2013 Apr 22.

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