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Items: 1 to 20 of 142

1.

Gene regulation by the act of long non-coding RNA transcription.

Kornienko AE, Guenzl PM, Barlow DP, Pauler FM.

BMC Biol. 2013 May 30;11:59. doi: 10.1186/1741-7007-11-59. Review.

2.

Local regulation of gene expression by lncRNA promoters, transcription and splicing.

Engreitz JM, Haines JE, Perez EM, Munson G, Chen J, Kane M, McDonel PE, Guttman M, Lander ES.

Nature. 2016 Nov 17;539(7629):452-455. doi: 10.1038/nature20149. Epub 2016 Oct 26.

PMID:
27783602
3.

Perspectives on the mechanism of transcriptional regulation by long non-coding RNAs.

Roberts TC, Morris KV, Weinberg MS.

Epigenetics. 2014 Jan;9(1):13-20. doi: 10.4161/epi.26700. Epub 2013 Oct 22. Review.

4.

LncRBase: an enriched resource for lncRNA information.

Chakraborty S, Deb A, Maji RK, Saha S, Ghosh Z.

PLoS One. 2014 Sep 18;9(9):e108010. doi: 10.1371/journal.pone.0108010. eCollection 2014.

5.

Regulation of lncRNA expression.

Wu Z, Liu X, Liu L, Deng H, Zhang J, Xu Q, Cen B, Ji A.

Cell Mol Biol Lett. 2014 Dec;19(4):561-75. doi: 10.2478/s11658-014-0212-6. Epub 2014 Oct 13. Review.

PMID:
25311814
6.

Small noncoding differentially methylated copy-number variants, including lncRNA genes, cause a lethal lung developmental disorder.

Szafranski P, Dharmadhikari AV, Brosens E, Gurha P, Kolodziejska KE, Zhishuo O, Dittwald P, Majewski T, Mohan KN, Chen B, Person RE, Tibboel D, de Klein A, Pinner J, Chopra M, Malcolm G, Peters G, Arbuckle S, Guiang SF 3rd, Hustead VA, Jessurun J, Hirsch R, Witte DP, Maystadt I, Sebire N, Fisher R, Langston C, Sen P, Stankiewicz P.

Genome Res. 2013 Jan;23(1):23-33. doi: 10.1101/gr.141887.112. Epub 2012 Oct 3.

7.

Non-coding Transcripts from Enhancers: New Insights into Enhancer Activity and Gene Expression Regulation.

Chen H, Du G, Song X, Li L.

Genomics Proteomics Bioinformatics. 2017 Jun;15(3):201-207. doi: 10.1016/j.gpb.2017.02.003. Epub 2017 Jun 17. Review.

8.

LncRNA ontology: inferring lncRNA functions based on chromatin states and expression patterns.

Li Y, Chen H, Pan T, Jiang C, Zhao Z, Wang Z, Zhang J, Xu J, Li X.

Oncotarget. 2015 Nov 24;6(37):39793-805. doi: 10.18632/oncotarget.5794.

9.

Long non-coding RNAs and their implications in cancer epigenetics.

Beckedorff FC, Amaral MS, Deocesano-Pereira C, Verjovski-Almeida S.

Biosci Rep. 2013 Aug 30;33(4). pii: e00061. doi: 10.1042/BSR20130054. Review.

10.

Long noncoding RNAs and their proposed functions in fibre development of cotton (Gossypium spp.).

Wang M, Yuan D, Tu L, Gao W, He Y, Hu H, Wang P, Liu N, Lindsey K, Zhang X.

New Phytol. 2015 Sep;207(4):1181-97. doi: 10.1111/nph.13429. Epub 2015 Apr 28.

11.

Targeting long non-coding RNAs in cancers: progress and prospects.

Li CH, Chen Y.

Int J Biochem Cell Biol. 2013 Aug;45(8):1895-910. doi: 10.1016/j.biocel.2013.05.030. Epub 2013 Jun 4. Review.

PMID:
23748105
12.

The long non-coding RNA Dali is an epigenetic regulator of neural differentiation.

Chalei V, Sansom SN, Kong L, Lee S, Montiel JF, Vance KW, Ponting CP.

Elife. 2014 Nov 21;3:e04530. doi: 10.7554/eLife.04530.

13.

Promoter analysis reveals globally differential regulation of human long non-coding RNA and protein-coding genes.

Alam T, Medvedeva YA, Jia H, Brown JB, Lipovich L, Bajic VB.

PLoS One. 2014 Oct 2;9(10):e109443. doi: 10.1371/journal.pone.0109443. eCollection 2014.

14.

A conserved noncoding sequence can function as a spermatocyte-specific enhancer and a bidirectional promoter for a ubiquitously expressed gene and a testis-specific long noncoding RNA.

Kurihara M, Shiraishi A, Satake H, Kimura AP.

J Mol Biol. 2014 Aug 26;426(17):3069-93. doi: 10.1016/j.jmb.2014.06.018. Epub 2014 Jul 11. Erratum in: J Mol Biol. 2015 May 22;427(10):1993-4.

PMID:
25020229
15.

A class of circadian long non-coding RNAs mark enhancers modulating long-range circadian gene regulation.

Fan Z, Zhao M, Joshi PD, Li P, Zhang Y, Guo W, Xu Y, Wang H, Zhao Z, Yan J.

Nucleic Acids Res. 2017 Jun 2;45(10):5720-5738. doi: 10.1093/nar/gkx156.

16.

Systematic Characterization of Long Noncoding RNAs Reveals the Contrasting Coordination of Cis- and Trans-Molecular Regulation in Human Fetal and Adult Hearts.

He C, Hu H, Wilson KD, Wu H, Feng J, Xia S, Churko J, Qu K, Chang HY, Wu JC.

Circ Cardiovasc Genet. 2016 Apr;9(2):110-8. doi: 10.1161/CIRCGENETICS.115.001264. Epub 2016 Feb 19.

17.

On the classification of long non-coding RNAs.

Ma L, Bajic VB, Zhang Z.

RNA Biol. 2013 Jun;10(6):925-33. doi: 10.4161/rna.24604. Epub 2013 Apr 15. Review.

18.

Long non-coding RNAs (lncRNAs) and their transcriptional control of inflammatory responses.

Mathy NW, Chen XM.

J Biol Chem. 2017 Jul 28;292(30):12375-12382. doi: 10.1074/jbc.R116.760884. Epub 2017 Jun 14. Review.

PMID:
28615453
19.

Unlinking an lncRNA from Its Associated cis Element.

Paralkar VR, Taborda CC, Huang P, Yao Y, Kossenkov AV, Prasad R, Luan J, Davies JO, Hughes JR, Hardison RC, Blobel GA, Weiss MJ.

Mol Cell. 2016 Apr 7;62(1):104-10. doi: 10.1016/j.molcel.2016.02.029. Epub 2016 Mar 31.

20.

Dynamic expression of long non-coding RNAs (lncRNAs) in adult zebrafish.

Kaushik K, Leonard VE, Kv S, Lalwani MK, Jalali S, Patowary A, Joshi A, Scaria V, Sivasubbu S.

PLoS One. 2013 Dec 31;8(12):e83616. doi: 10.1371/journal.pone.0083616. eCollection 2013.

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