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Items: 1 to 20 of 126

1.
2.

Comparison of quantitative real time PCR with Sequencing and ribosomal RNA-FISH for the identification of fungi in formalin fixed, paraffin-embedded tissue specimens.

Rickerts V, Khot PD, Myerson D, Ko DL, Lambrecht E, Fredricks DN.

BMC Infect Dis. 2011 Jul 26;11:202. doi: 10.1186/1471-2334-11-202.

3.

Improving molecular detection of fungal DNA in formalin-fixed paraffin-embedded tissues: comparison of five tissue DNA extraction methods using panfungal PCR.

Muñoz-Cadavid C, Rudd S, Zaki SR, Patel M, Moser SA, Brandt ME, Gómez BL.

J Clin Microbiol. 2010 Jun;48(6):2147-53. doi: 10.1128/JCM.00459-10.

4.

Identification of Fusarium species in formalin-fixed and paraffin-embedded sections by in situ hybridization using peptide nucleic acid probes.

Shinozaki M, Okubo Y, Sasai D, Nakayama H, Murayama SY, Ide T, Wakayama M, Hiruta N, Shibuya K.

J Clin Microbiol. 2011 Mar;49(3):808-13. doi: 10.1128/JCM.01149-10.

5.

Development and evaluation of nucleic acid-based techniques for an auxiliary diagnosis of invasive fungal infections in formalin-fixed and paraffin-embedded (FFPE) tissues.

Shinozaki M, Okubo Y, Sasai D, Nakayama H, Ishiwatari T, Murayama S, Tochigi N, Wakayama M, Nemoto T, Shibuya K.

Med Mycol J. 2012;53(4):241-5. Review.

6.

Degradation of fungal DNA in formalin-fixed paraffin-embedded sinus fungal balls hampers reliable sequence-based identification of fungi.

Cabaret O, Toussain G, Abermil N, Alsamad IA, Botterel F, Costa JM, Papon JF, Bretagne S.

Med Mycol. 2011 Apr;49(3):329-32. doi: 10.3109/13693786.2010.525537.

PMID:
20950222
7.

Detection and identification of yeasts from formalin-fixed, paraffin-embedded tissue by use of PCR-electrospray ionization mass spectrometry.

Simner PJ, Buckwalter SP, Uhl JR, Wengenack NL, Pritt BS.

J Clin Microbiol. 2013 Nov;51(11):3731-4. doi: 10.1128/JCM.01967-13.

8.

In situ hybridization for the differentiation of Aspergillus, Fusarium, and Pseudallescheria species in tissue section.

Hayden RT, Isotalo PA, Parrett T, Wolk DM, Qian X, Roberts GD, Lloyd RV.

Diagn Mol Pathol. 2003 Mar;12(1):21-6.

PMID:
12605032
9.

Application of in situ hybridization to tissue sections for identification of molds causing invasive fungal infection.

Shinozaki M, Okubo Y, Nakayama H, Mitsuda A, Ide T, Yamagata Murayama S, Shibuya K.

Nihon Ishinkin Gakkai Zasshi. 2009;50(2):75-83. Review.

10.

In situ hybridization for the identification of filamentous fungi in tissue section.

Hayden RT, Qian X, Procop GW, Roberts GD, Lloyd RV.

Diagn Mol Pathol. 2002 Jun;11(2):119-26.

PMID:
12045716
11.

Molecular detection and identification of zygomycetes species from paraffin-embedded tissues in a murine model of disseminated zygomycosis: a collaborative European Society of Clinical Microbiology and Infectious Diseases (ESCMID) Fungal Infection Study Group (EFISG) evaluation.

Dannaoui E, Schwarz P, Slany M, Loeffler J, Jorde AT, Cuenca-Estrella M, Hauser PM, Shrief R, Huerre M, Freiberger T, Gaustad P, Rodriguez-Tudela JL, Bille J, Denning DW, Bretagne S, Lortholary O.

J Clin Microbiol. 2010 Jun;48(6):2043-6. doi: 10.1128/JCM.02319-09.

12.

Identification of fungal pathogens in Formalin-fixed, Paraffin-embedded tissue samples by molecular methods.

Rickerts V.

Fungal Biol. 2016 Feb;120(2):279-87. doi: 10.1016/j.funbio.2015.07.002.

PMID:
26781382
13.

In situ hybridization for the identification of yeastlike organisms in tissue section.

Hayden RT, Qian X, Roberts GD, Lloyd RV.

Diagn Mol Pathol. 2001 Mar;10(1):15-23.

PMID:
11277390
14.

Utility of DNA sequencing for direct identification of invasive fungi from fresh and formalin-fixed specimens.

Moncada PA, Budvytiene I, Ho DY, Deresinski SC, Montoya JG, Banaei N.

Am J Clin Pathol. 2013 Aug;140(2):203-8. doi: 10.1309/AJCPNSU2SDZD9WPW.

15.

Development and clinical application of a panfungal PCR assay to detect and identify fungal DNA in tissue specimens.

Lau A, Chen S, Sorrell T, Carter D, Malik R, Martin P, Halliday C.

J Clin Microbiol. 2007 Feb;45(2):380-5.

16.

Performances of two different panfungal PCRs to detect mould DNA in formalin-fixed paraffin-embedded tissue: what are the limiting factors?

Babouee Flury B, Weisser M, Prince SS, Bubendorf L, Battegay M, Frei R, Goldenberger D.

BMC Infect Dis. 2014 Dec 18;14:692. doi: 10.1186/s12879-014-0692-z.

18.

Detection of tropical fungi in formalin-fixed, paraffin-embedded tissue: still an indication for microscopy in times of sequence-based diagnosis?

Frickmann H, Loderstaedt U, Racz P, Tenner-Racz K, Eggert P, Haeupler A, Bialek R, Hagen RM.

Biomed Res Int. 2015;2015:938721. doi: 10.1155/2015/938721.

20.

In situ hybridization for Coccidioides immitis 5.8S ribosomal RNA sequences in formalin-fixed, paraffin-embedded pulmonary specimens using a locked nucleic acid probe: a rapid means for identification in tissue sections.

Montone KT, Litzky LA, Feldman MD, Peterman H, Mathis B, Baliff J, Kaiser LR, Kucharczuk J, Nachamkin I.

Diagn Mol Pathol. 2010 Jun;19(2):99-104. doi: 10.1097/PDM.0b013e3181b3aa55.

PMID:
20502187
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