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Items: 1 to 20 of 142

1.

SNP typing reveals similarity in Mycobacterium tuberculosis genetic diversity between Portugal and Northeast Brazil.

Lopes JS, Marques I, Soares P, Nebenzahl-Guimaraes H, Costa J, Miranda A, Duarte R, Alves A, Macedo R, Duarte TA, Barbosa T, Oliveira M, Nery JS, Boechat N, Pereira SM, Barreto ML, Pereira-Leal J, Gomes MG, Penha-Goncalves C.

Infect Genet Evol. 2013 Aug;18:238-46. doi: 10.1016/j.meegid.2013.04.028. Epub 2013 May 3.

PMID:
23648425
2.

Strain classification of Mycobacterium tuberculosis isolates in Brazil based on genotypes obtained by spoligotyping, mycobacterial interspersed repetitive unit typing and the presence of large sequence and single nucleotide polymorphism.

Vasconcellos SE, Acosta CC, Gomes LL, Conceição EC, Lima KV, de Araujo MI, Leite Mde L, Tannure F, Caldas PC, Gomes HM, Santos AR, Gomgnimbou MK, Sola C, Couvin D, Rastogi N, Boechat N, Suffys PN.

PLoS One. 2014 Oct 14;9(10):e107747. doi: 10.1371/journal.pone.0107747. eCollection 2014.

3.

The forest behind the tree: phylogenetic exploration of a dominant Mycobacterium tuberculosis strain lineage from a high tuberculosis burden country.

Cardoso Oelemann M, Gomes HM, Willery E, Possuelo L, Batista Lima KV, Allix-Béguec C, Locht C, Goguet de la Salmonière YO, Gutierrez MC, Suffys P, Supply P.

PLoS One. 2011 Mar 25;6(3):e18256. doi: 10.1371/journal.pone.0018256.

4.

Spoligotype-based comparative population structure analysis of multidrug-resistant and isoniazid-monoresistant Mycobacterium tuberculosis complex clinical isolates in Poland.

Jagielski T, Augustynowicz-Kopec E, Zozio T, Rastogi N, Zwolska Z.

J Clin Microbiol. 2010 Nov;48(11):3899-909. doi: 10.1128/JCM.00572-10. Epub 2010 Sep 1.

5.

Combined Genotypic, Phylogenetic, and Epidemiologic Analyses of Mycobacterium tuberculosis Genetic Diversity in the Rhône Alpes Region, France.

Pichat C, Couvin D, Carret G, Frédénucci I, Jacomo V, Carricajo A, Boisset S, Dumitrescu O, Flandrois JP, Lina G, Rastogi N.

PLoS One. 2016 Apr 29;11(4):e0153580. doi: 10.1371/journal.pone.0153580. eCollection 2016.

6.

Mycobacterium tuberculosis belonging to family LAM and sublineage RD(Rio): common strains in Southern Brazil for over 10 years.

Soares RO, de Macedo MB, von Groll A, da Silva PE.

Braz J Microbiol. 2014 Mar 10;44(4):1251-5. eCollection 2013 Dec.

7.

Molecular epidemiology of tuberculosis in Sicily, Italy: what has changed after a decade?

Bonura C, Gomgnimbou MK, Refrégier G, Aleo A, Fasciana T, Giammanco A, Sola C, Mammina C.

BMC Infect Dis. 2014 Nov 19;14:602. doi: 10.1186/s12879-014-0602-4.

8.

Spoligotypes of Mycobacterium tuberculosis complex isolates from patients residents of 11 states of Brazil.

Gomes HM, Elias AR, Oelemann MA, Pereira MA, Montes FF, Marsico AG, Kritski AL, Filho Ldos A, Caldas PC, Possuelo LG, Cafrune P, Rossetti ML, Lucena N, Saad MH, Cavalcanti HR, Leite CQ, de Brito RC, Lopes ML, Lima K, Souza M, Trindade Rde C, Zozio T, Sola C, Rastogi N, Suffys PN.

Infect Genet Evol. 2012 Jun;12(4):649-56. doi: 10.1016/j.meegid.2011.08.027. Epub 2011 Sep 1.

PMID:
21907830
9.

Implication of the RD(Rio) Mycobacterium tuberculosis sublineage in multidrug resistant tuberculosis in Portugal.

David S, Duarte EL, Leite CQ, Ribeiro JN, Maio JN, Paixão E, Portugal C, Sancho L, Germano de Sousa J.

Infect Genet Evol. 2012 Oct;12(7):1362-7. doi: 10.1016/j.meegid.2012.04.021. Epub 2012 May 5.

PMID:
22569099
10.

Evaluation of Mycobacterium tuberculosis typing methods in a 4-year study in Schleswig-Holstein, Northern Germany.

Roetzer A, Schuback S, Diel R, Gasau F, Ubben T, di Nauta A, Richter E, Rüsch-Gerdes S, Niemann S.

J Clin Microbiol. 2011 Dec;49(12):4173-8. doi: 10.1128/JCM.05293-11. Epub 2011 Oct 12.

11.

Impact of immigration on tuberculosis in a low-incidence area of Italy: a molecular epidemiological approach.

Garzelli C, Lari N, Cuccu B, Tortoli E, Rindi L.

Clin Microbiol Infect. 2010 Nov;16(11):1691-7. doi: 10.1111/j.1469-0691.2009.03149.x.

12.

The genotypic population structure of Mycobacterium tuberculosis complex from Moroccan patients reveals a predominance of Euro-American lineages.

Lahlou O, Millet J, Chaoui I, Sabouni R, Filali-Maltouf A, Akrim M, El Mzibri M, Rastogi N, El Aouad R.

PLoS One. 2012;7(10):e47113. doi: 10.1371/journal.pone.0047113. Epub 2012 Oct 15.

13.

Current trends of Mycobacterium tuberculosis molecular epidemiology in Saudi Arabia and associated demographical factors.

Al-Hajoj S, Varghese B, Al-Habobe F, Shoukri MM, Mulder A, van Soolingen D.

Infect Genet Evol. 2013 Jun;16:362-8. doi: 10.1016/j.meegid.2013.03.019. Epub 2013 Mar 22.

PMID:
23523599
14.

Genotyping of genetically monomorphic bacteria: DNA sequencing in Mycobacterium tuberculosis highlights the limitations of current methodologies.

Comas I, Homolka S, Niemann S, Gagneux S.

PLoS One. 2009 Nov 12;4(11):e7815. doi: 10.1371/journal.pone.0007815.

15.

Discovery of a novel Mycobacterium tuberculosis lineage that is a major cause of tuberculosis in Rio de Janeiro, Brazil.

Lazzarini LC, Huard RC, Boechat NL, Gomes HM, Oelemann MC, Kurepina N, Shashkina E, Mello FC, Gibson AL, Virginio MJ, Marsico AG, Butler WR, Kreiswirth BN, Suffys PN, Lapa E Silva JR, Ho JL.

J Clin Microbiol. 2007 Dec;45(12):3891-902. Epub 2007 Sep 26.

16.

Genotyping of the Mycobacterium tuberculosis complex using MIRUs: association with VNTR and spoligotyping for molecular epidemiology and evolutionary genetics.

Sola C, Filliol I, Legrand E, Lesjean S, Locht C, Supply P, Rastogi N.

Infect Genet Evol. 2003 Jul;3(2):125-33.

PMID:
12809807
17.

Mycobacterium tuberculosis Beijing lineage favors the spread of multidrug-resistant tuberculosis in the Republic of Georgia.

Niemann S, Diel R, Khechinashvili G, Gegia M, Mdivani N, Tang YW.

J Clin Microbiol. 2010 Oct;48(10):3544-50. doi: 10.1128/JCM.00715-10. Epub 2010 Aug 11.

18.

Insights into the population structure of Mycobacterium tuberculosis using spoligotyping and RDRio in a southeastern Brazilian prison unit.

Huber FD, Sánchez A, Gomes HM, Vasconcellos S, Massari V, Barreto A, Cesconi V, de Almeida Machado SM, Gomgnimbou MK, Sola C, Larouzé B, Suffys PN, Saad MH.

Infect Genet Evol. 2014 Aug;26:194-202. doi: 10.1016/j.meegid.2014.05.031. Epub 2014 Jun 5.

PMID:
24907670
19.

Mycobacterium tuberculosis ecology in Venezuela: epidemiologic correlates of common spoligotypes and a large clonal cluster defined by MIRU-VNTR-24.

Abadía E, Sequera M, Ortega D, Méndez MV, Escalona A, Da Mata O, Izarra E, Rojas Y, Jaspe R, Motiwala AS, Alland D, de Waard J, Takiff HE.

BMC Infect Dis. 2009 Aug 6;9:122. doi: 10.1186/1471-2334-9-122.

20.

A conformal Bayesian network for classification of Mycobacterium tuberculosis complex lineages.

Aminian M, Shabbeer A, Bennett KP.

BMC Bioinformatics. 2010 Apr 29;11 Suppl 3:S4. doi: 10.1186/1471-2105-11-S3-S4.

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