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Items: 1 to 20 of 198

1.

Chapter 16: text mining for translational bioinformatics.

Cohen KB, Hunter LE.

PLoS Comput Biol. 2013 Apr;9(4):e1003044. doi: 10.1371/journal.pcbi.1003044. Epub 2013 Apr 25.

2.

Knowledge based word-concept model estimation and refinement for biomedical text mining.

Jimeno Yepes A, Berlanga R.

J Biomed Inform. 2015 Feb;53:300-7. doi: 10.1016/j.jbi.2014.11.015. Epub 2014 Dec 12.

3.

Zsyntax: a formal language for molecular biology with projected applications in text mining and biological prediction.

Boniolo G, D'Agostino M, Di Fiore PP.

PLoS One. 2010 Mar 3;5(3):e9511. doi: 10.1371/journal.pone.0009511.

4.

A survey on annotation tools for the biomedical literature.

Neves M, Leser U.

Brief Bioinform. 2014 Mar;15(2):327-40. doi: 10.1093/bib/bbs084. Epub 2012 Dec 18. Review.

PMID:
23255168
5.

Survey of Natural Language Processing Techniques in Bioinformatics.

Zeng Z, Shi H, Wu Y, Hong Z.

Comput Math Methods Med. 2015;2015:674296. doi: 10.1155/2015/674296. Epub 2015 Oct 7. Review.

6.

Community challenges in biomedical text mining over 10 years: success, failure and the future.

Huang CC, Lu Z.

Brief Bioinform. 2016 Jan;17(1):132-44. doi: 10.1093/bib/bbv024. Epub 2015 May 1. Review.

7.

Introducing Machine Learning Concepts with WEKA.

Smith TC, Frank E.

Methods Mol Biol. 2016;1418:353-78. doi: 10.1007/978-1-4939-3578-9_17.

PMID:
27008023
8.

Text mining for traditional Chinese medical knowledge discovery: a survey.

Zhou X, Peng Y, Liu B.

J Biomed Inform. 2010 Aug;43(4):650-60. doi: 10.1016/j.jbi.2010.01.002. Epub 2010 Jan 13.

9.

Biomarker identification using text mining.

Li H, Liu C.

Comput Math Methods Med. 2012;2012:135780. doi: 10.1155/2012/135780. Epub 2012 Nov 11.

10.

Feature selection methods for big data bioinformatics: A survey from the search perspective.

Wang L, Wang Y, Chang Q.

Methods. 2016 Dec 1;111:21-31. doi: 10.1016/j.ymeth.2016.08.014. Epub 2016 Aug 31. Review.

PMID:
27592382
11.

Big data bioinformatics.

Greene CS, Tan J, Ung M, Moore JH, Cheng C.

J Cell Physiol. 2014 Dec;229(12):1896-900. doi: 10.1002/jcp.24662. Review. Erratum in: J Cell Physiol. 2016 Jan;231(1):257.

12.

Redundancy in electronic health record corpora: analysis, impact on text mining performance and mitigation strategies.

Cohen R, Elhadad M, Elhadad N.

BMC Bioinformatics. 2013 Jan 16;14:10. doi: 10.1186/1471-2105-14-10.

13.

Text mining biomedical literature for constructing gene regulatory networks.

Song YL, Chen SS.

Interdiscip Sci. 2009 Sep;1(3):179-86. doi: 10.1007/s12539-009-0028-7. Epub 2009 Aug 7.

PMID:
20640836
14.

Translational bioinformatics in psychoneuroimmunology: methods and applications.

Yan Q.

Methods Mol Biol. 2012;934:383-400. doi: 10.1007/978-1-62703-071-7_20.

PMID:
22933157
15.

Overview of the BioCreative III Workshop.

Arighi CN, Lu Z, Krallinger M, Cohen KB, Wilbur WJ, Valencia A, Hirschman L, Wu CH.

BMC Bioinformatics. 2011 Oct 3;12 Suppl 8:S1. doi: 10.1186/1471-2105-12-S8-S1.

16.

SVS: data and knowledge integration in computational biology.

Zycinski G, Barla A, Verri A.

Conf Proc IEEE Eng Med Biol Soc. 2011;2011:6474-8. doi: 10.1109/IEMBS.2011.6091598.

PMID:
22255821
17.

Metabolic Pathway Mining.

Czarnecki JM, Shepherd AJ.

Methods Mol Biol. 2017;1526:139-158.

PMID:
27896740
18.

Applying hybrid reasoning to mine for associative features in biological data.

Galitsky BA, Kuznetsov SO, Vinogradov DV.

J Biomed Inform. 2007 Jun;40(3):203-20. Epub 2006 Jul 22.

19.

Functional evaluation of out-of-the-box text-mining tools for data-mining tasks.

Jung K, LePendu P, Iyer S, Bauer-Mehren A, Percha B, Shah NH.

J Am Med Inform Assoc. 2015 Jan;22(1):121-31. doi: 10.1136/amiajnl-2014-002902. Epub 2014 Oct 21.

20.

BIOADI: a machine learning approach to identifying abbreviations and definitions in biological literature.

Kuo CJ, Ling MH, Lin KT, Hsu CN.

BMC Bioinformatics. 2009 Dec 3;10 Suppl 15:S7. doi: 10.1186/1471-2105-10-S15-S7.

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