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Items: 1 to 20 of 86

1.

Off-target effect of endogenous siRNA derived from RMRP in human cells.

Maida Y, Kyo S, Lassmann T, Hayashizaki Y, Masutomi K.

Int J Mol Sci. 2013 Apr 29;14(5):9305-18. doi: 10.3390/ijms14059305.

2.

Noncanonical microRNAs and endogenous siRNAs in normal and psoriatic human skin.

Xia J, Joyce CE, Bowcock AM, Zhang W.

Hum Mol Genet. 2013 Feb 15;22(4):737-48. doi: 10.1093/hmg/dds481. Epub 2012 Nov 21.

3.

Molecular mechanisms of RNA-triggered gene silencing machineries.

Li Z, Rana TM.

Acc Chem Res. 2012 Jul 17;45(7):1122-31. doi: 10.1021/ar200253u. Epub 2012 Feb 3.

4.

Identification and characterization of microRNAs and endogenous siRNAs in Schistosoma japonicum.

Hao L, Cai P, Jiang N, Wang H, Chen Q.

BMC Genomics. 2010 Jan 21;11:55. doi: 10.1186/1471-2164-11-55.

5.

Roles of target site location and sequence complementarity in trans-acting siRNA formation in Arabidopsis.

Zhang C, Ng DW, Lu J, Chen ZJ.

Plant J. 2012 Jan;69(2):217-26. doi: 10.1111/j.1365-313X.2011.04783.x. Epub 2011 Oct 25.

6.

Contribution of natural antisense transcription to an endogenous siRNA signature in human cells.

Werner A, Cockell S, Falconer J, Carlile M, Alnumeir S, Robinson J.

BMC Genomics. 2014 Jan 13;15:19. doi: 10.1186/1471-2164-15-19.

7.

In silico identification of novel endo-siRNAs.

Schuster A, Hennig GW, Ortogero N, Luong D, Yan W.

Methods Mol Biol. 2015;1218:341-51. doi: 10.1007/978-1-4939-1538-5_21.

PMID:
25319662
8.

MicroRNA-like off-target transcript regulation by siRNAs is species specific.

Burchard J, Jackson AL, Malkov V, Needham RH, Tan Y, Bartz SR, Dai H, Sachs AB, Linsley PS.

RNA. 2009 Feb;15(2):308-15. doi: 10.1261/rna.1326809.

9.

Modified siRNA structure with a single nucleotide bulge overcomes conventional siRNA-mediated off-target silencing.

Dua P, Yoo JW, Kim S, Lee DK.

Mol Ther. 2011 Sep;19(9):1676-87. doi: 10.1038/mt.2011.109. Epub 2011 Jun 14.

10.

Selective silencing of gene target expression by siRNA expression plasmids in human cervical cancer cells.

Peralta-Zaragoza O, De-la-O-Gómez F, Deas J, Fernández-Tilapa G, Fierros-Zárate Gdel S, Gómez-Cerón C, Burguete-García A, Torres-Poveda K, Bermúdez-Morales VH, Rodríguez-Dorantes M, Pérez-Plasencia C, Madrid-Marina V.

Methods Mol Biol. 2015;1249:153-71. doi: 10.1007/978-1-4939-2013-6_11.

PMID:
25348304
11.

Single base mismatches in the mRNA target site allow specific seed region-mediated off-target binding of siRNA targeting human coagulation factor 7.

Ravon M, Berrera M, Ebeling M, Certa U.

RNA Biol. 2012 Jan;9(1):87-97. doi: 10.4161/rna.9.1.18121. Epub 2012 Jan 1.

12.

Analysis of putative miRNA binding sites and mRNA 3' ends as targets for siRNA-mediated gene knockdown.

Bergauer T, Krueger U, Lader E, Pilk S, Wolter I, Bielke W.

Oligonucleotides. 2009 Mar;19(1):41-52. doi: 10.1089/oli.2008.0154.

PMID:
19196098
13.

siRNAs can function as miRNAs.

Doench JG, Petersen CP, Sharp PA.

Genes Dev. 2003 Feb 15;17(4):438-42.

14.

Interacting endogenous and exogenous RNAi pathways in Caenorhabditis elegans.

Lee RC, Hammell CM, Ambros V.

RNA. 2006 Apr;12(4):589-97. Epub 2006 Feb 17.

15.

Hydrophobization and bioconjugation for enhanced siRNA delivery and targeting.

De Paula D, Bentley MV, Mahato RI.

RNA. 2007 Apr;13(4):431-56. Epub 2007 Feb 28. Review.

16.

Ancient endo-siRNA pathways reveal new tricks.

Claycomb JM.

Curr Biol. 2014 Aug 4;24(15):R703-15. doi: 10.1016/j.cub.2014.06.009. Review.

17.

Microarray analysis of Drosophila dicer-2 mutants reveals potential regulation of mitochondrial metabolism by endogenous siRNAs.

Lim DH, Lee L, Oh CT, Kim NH, Hwang S, Han SJ, Lee YS.

J Cell Biochem. 2013 Feb;114(2):418-27. doi: 10.1002/jcb.24379.

PMID:
22961661
18.

miRNA, siRNA, piRNA: Knowns of the unknown.

Kutter C, Svoboda P.

RNA Biol. 2008 Oct-Dec;5(4):181-8. Epub 2008 Oct 16.

PMID:
19182524
19.

Expression profiling reveals off-target gene regulation by RNAi.

Jackson AL, Bartz SR, Schelter J, Kobayashi SV, Burchard J, Mao M, Li B, Cavet G, Linsley PS.

Nat Biotechnol. 2003 Jun;21(6):635-7. Epub 2003 May 18.

PMID:
12754523
20.

Small RNAs derived from lncRNA RNase MRP have gene-silencing activity relevant to human cartilage-hair hypoplasia.

Rogler LE, Kosmyna B, Moskowitz D, Bebawee R, Rahimzadeh J, Kutchko K, Laederach A, Notarangelo LD, Giliani S, Bouhassira E, Frenette P, Roy-Chowdhury J, Rogler CE.

Hum Mol Genet. 2014 Jan 15;23(2):368-82. doi: 10.1093/hmg/ddt427. Epub 2013 Sep 5.

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