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Items: 1 to 20 of 166

1.

Substrate-specific structural rearrangements of human Dicer.

Taylor DW, Ma E, Shigematsu H, Cianfrocco MA, Noland CL, Nagayama K, Nogales E, Doudna JA, Wang HW.

Nat Struct Mol Biol. 2013 Jun;20(6):662-70. doi: 10.1038/nsmb.2564. Epub 2013 Apr 28.

2.

Substrate-specific kinetics of Dicer-catalyzed RNA processing.

Chakravarthy S, Sternberg SH, Kellenberger CA, Doudna JA.

J Mol Biol. 2010 Dec 3;404(3):392-402. doi: 10.1016/j.jmb.2010.09.030. Epub 2010 Oct 13.

3.

Coordinated activities of human dicer domains in regulatory RNA processing.

Ma E, Zhou K, Kidwell MA, Doudna JA.

J Mol Biol. 2012 Sep 28;422(4):466-76. doi: 10.1016/j.jmb.2012.06.009. Epub 2012 Jun 19.

4.

Two-step cleavage of hairpin RNA with 5' overhangs by human DICER.

Ando Y, Maida Y, Morinaga A, Burroughs AM, Kimura R, Chiba J, Suzuki H, Masutomi K, Hayashizaki Y.

BMC Mol Biol. 2011 Feb 9;12:6. doi: 10.1186/1471-2199-12-6.

5.

Homodimeric structure and double-stranded RNA cleavage activity of the C-terminal RNase III domain of human dicer.

Takeshita D, Zenno S, Lee WC, Nagata K, Saigo K, Tanokura M.

J Mol Biol. 2007 Nov 16;374(1):106-20. Epub 2007 Sep 8.

PMID:
17920623
6.

Single processing center models for human Dicer and bacterial RNase III.

Zhang H, Kolb FA, Jaskiewicz L, Westhof E, Filipowicz W.

Cell. 2004 Jul 9;118(1):57-68.

7.

Differential roles of human Dicer-binding proteins TRBP and PACT in small RNA processing.

Lee HY, Zhou K, Smith AM, Noland CL, Doudna JA.

Nucleic Acids Res. 2013 Jul;41(13):6568-76. doi: 10.1093/nar/gkt361. Epub 2013 May 9.

8.

Structure of the human Dicer-TRBP complex by electron microscopy.

Lau PW, Potter CS, Carragher B, MacRae IJ.

Structure. 2009 Oct 14;17(10):1326-32. doi: 10.1016/j.str.2009.08.013.

9.

A universal small molecule, inorganic phosphate, restricts the substrate specificity of Dicer-2 in small RNA biogenesis.

Fukunaga R, Zamore PD.

Cell Cycle. 2014;13(11):1671-6. doi: 10.4161/cc.29066. Epub 2014 Apr 30.

10.

The role of human Dicer-dsRBD in processing small regulatory RNAs.

Wostenberg C, Lary JW, Sahu D, Acevedo R, Quarles KA, Cole JL, Showalter SA.

PLoS One. 2012;7(12):e51829. doi: 10.1371/journal.pone.0051829. Epub 2012 Dec 13.

11.

Short RNA duplexes guide sequence-dependent cleavage by human Dicer.

Bergeron L Jr, Perreault JP, Abou Elela S.

RNA. 2010 Dec;16(12):2464-73. doi: 10.1261/rna.2346510. Epub 2010 Oct 25.

12.

How short RNAs impact the human ribonuclease Dicer activity: putative regulatory feedback-loops and other RNA-mediated mechanisms controlling microRNA processing.

Koralewska N, Hoffmann W, Pokornowska M, Milewski M, Lipinska A, Bienkowska-Szewczyk K, Figlerowicz M, Kurzynska-Kokorniak A.

Acta Biochim Pol. 2016;63(4):773-783. Epub 2016 Oct 13.

13.

Phosphate and R2D2 restrict the substrate specificity of Dicer-2, an ATP-driven ribonuclease.

Cenik ES, Fukunaga R, Lu G, Dutcher R, Wang Y, Tanaka Hall TM, Zamore PD.

Mol Cell. 2011 Apr 22;42(2):172-84. doi: 10.1016/j.molcel.2011.03.002. Epub 2011 Mar 17.

14.

The contributions of dsRNA structure to Dicer specificity and efficiency.

Vermeulen A, Behlen L, Reynolds A, Wolfson A, Marshall WS, Karpilow J, Khvorova A.

RNA. 2005 May;11(5):674-82. Epub 2005 Apr 5.

15.

Molecular mechanisms of Dicer: endonuclease and enzymatic activity.

Song MS, Rossi JJ.

Biochem J. 2017 May 4;474(10):1603-1618. doi: 10.1042/BCJ20160759. Review.

16.

The molecular architecture of human Dicer.

Lau PW, Guiley KZ, De N, Potter CS, Carragher B, MacRae IJ.

Nat Struct Mol Biol. 2012 Mar 18;19(4):436-40. doi: 10.1038/nsmb.2268.

17.

Inorganic phosphate blocks binding of pre-miRNA to Dicer-2 via its PAZ domain.

Fukunaga R, Colpan C, Han BW, Zamore PD.

EMBO J. 2014 Feb 18;33(4):371-84. doi: 10.1002/embj.201387176. Epub 2014 Jan 31.

18.

A comprehensive analysis of precursor microRNA cleavage by human Dicer.

Feng Y, Zhang X, Graves P, Zeng Y.

RNA. 2012 Nov;18(11):2083-92. doi: 10.1261/rna.033688.112. Epub 2012 Sep 14.

19.

Structure of precursor microRNA's terminal loop regulates human Dicer's dicing activity by switching DExH/D domain.

Liu Z, Wang J, Li G, Wang HW.

Protein Cell. 2015 Mar;6(3):185-93. doi: 10.1007/s13238-014-0124-2. Epub 2014 Dec 31.

20.

Plant dicer-like proteins: double-stranded RNA-cleaving enzymes for small RNA biogenesis.

Fukudome A, Fukuhara T.

J Plant Res. 2017 Jan;130(1):33-44. doi: 10.1007/s10265-016-0877-1. Epub 2016 Nov 24. Review.

PMID:
27885504

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