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Items: 1 to 20 of 79

1.

TUMIR: an experimentally supported database of microRNA deregulation in various cancers.

Dong L, Luo M, Wang F, Zhang J, Li T, Yu J.

J Clin Bioinforma. 2013 Apr 17;3(1):7. doi: 10.1186/2043-9113-3-7.

2.

miR2Disease: a manually curated database for microRNA deregulation in human disease.

Jiang Q, Wang Y, Hao Y, Juan L, Teng M, Zhang X, Li M, Wang G, Liu Y.

Nucleic Acids Res. 2009 Jan;37(Database issue):D98-104. doi: 10.1093/nar/gkn714. Epub 2008 Oct 15.

3.

Lnc2Cancer: a manually curated database of experimentally supported lncRNAs associated with various human cancers.

Ning S, Zhang J, Wang P, Zhi H, Wang J, Liu Y, Gao Y, Guo M, Yue M, Wang L, Li X.

Nucleic Acids Res. 2016 Jan 4;44(D1):D980-5. doi: 10.1093/nar/gkv1094. Epub 2015 Oct 19.

4.

The database of experimentally supported targets: a functional update of TarBase.

Papadopoulos GL, Reczko M, Simossis VA, Sethupathy P, Hatzigeorgiou AG.

Nucleic Acids Res. 2009 Jan;37(Database issue):D155-8. doi: 10.1093/nar/gkn809. Epub 2008 Oct 27.

5.

miRSponge: a manually curated database for experimentally supported miRNA sponges and ceRNAs.

Wang P, Zhi H, Zhang Y, Liu Y, Zhang J, Gao Y, Guo M, Ning S, Li X.

Database (Oxford). 2015 Sep 30;2015. pii: bav098. doi: 10.1093/database/bav098. Print 2015.

6.

TarBase: A comprehensive database of experimentally supported animal microRNA targets.

Sethupathy P, Corda B, Hatzigeorgiou AG.

RNA. 2006 Feb;12(2):192-7. Epub 2005 Dec 22.

7.

miRecords: an integrated resource for microRNA-target interactions.

Xiao F, Zuo Z, Cai G, Kang S, Gao X, Li T.

Nucleic Acids Res. 2009 Jan;37(Database issue):D105-10. doi: 10.1093/nar/gkn851. Epub 2008 Nov 7.

8.

TarBase 6.0: capturing the exponential growth of miRNA targets with experimental support.

Vergoulis T, Vlachos IS, Alexiou P, Georgakilas G, Maragkakis M, Reczko M, Gerangelos S, Koziris N, Dalamagas T, Hatzigeorgiou AG.

Nucleic Acids Res. 2012 Jan;40(Database issue):D222-9. doi: 10.1093/nar/gkr1161. Epub 2011 Dec 1.

9.

miReg: a resource for microRNA regulation.

Barh D, Bhat D, Viero C.

J Integr Bioinform. 2010 Aug 6;7(1). doi: 10.2390/biecoll-jib-2010-144.

PMID:
20693604
10.

miRFANs: an integrated database for Arabidopsis thaliana microRNA function annotations.

Liu H, Jin T, Liao R, Wan L, Xu B, Zhou S, Guan J.

BMC Plant Biol. 2012 May 14;12:68. doi: 10.1186/1471-2229-12-68.

11.

Ssa miRNAs DB: Online repository of in silico predicted miRNAs in Salmo salar.

Reyes D, Cepeda V, González R, Vidal R.

Bioinformation. 2012;8(6):284-6. doi: 10.6026/97320630008284. Epub 2012 Mar 31.

12.

Review of MicroRNA Deregulation in Oral Cancer. Part I.

Kolokythas A, Miloro M, Zhou X.

J Oral Maxillofac Res. 2011 Jul 1;2(2):e1. doi: 10.5037/jomr.2011.2201. Review.

13.

HMDD v2.0: a database for experimentally supported human microRNA and disease associations.

Li Y, Qiu C, Tu J, Geng B, Yang J, Jiang T, Cui Q.

Nucleic Acids Res. 2014 Jan;42(Database issue):D1070-4. doi: 10.1093/nar/gkt1023. Epub 2013 Nov 4.

14.

PASmiR: a literature-curated database for miRNA molecular regulation in plant response to abiotic stress.

Zhang S, Yue Y, Sheng L, Wu Y, Fan G, Li A, Hu X, Shangguan M, Wei C.

BMC Plant Biol. 2013 Mar 1;13:33. doi: 10.1186/1471-2229-13-33.

15.

DIANA-TarBase v7.0: indexing more than half a million experimentally supported miRNA:mRNA interactions.

Vlachos IS, Paraskevopoulou MD, Karagkouni D, Georgakilas G, Vergoulis T, Kanellos I, Anastasopoulos IL, Maniou S, Karathanou K, Kalfakakou D, Fevgas A, Dalamagas T, Hatzigeorgiou AG.

Nucleic Acids Res. 2015 Jan;43(Database issue):D153-9. doi: 10.1093/nar/gku1215. Epub 2014 Nov 21.

16.

miREnvironment database: providing a bridge for microRNAs, environmental factors and phenotypes.

Yang Q, Qiu C, Yang J, Wu Q, Cui Q.

Bioinformatics. 2011 Dec 1;27(23):3329-30. doi: 10.1093/bioinformatics/btr556. Epub 2011 Oct 7.

PMID:
21984757
17.

DIANA-TarBase and DIANA Suite Tools: Studying Experimentally Supported microRNA Targets.

Paraskevopoulou MD, Vlachos IS, Hatzigeorgiou AG.

Curr Protoc Bioinformatics. 2016 Sep 7;55:12.14.1-12.14.18. doi: 10.1002/cpbi.12.

PMID:
27603020
18.

microPIR: an integrated database of microRNA target sites within human promoter sequences.

Piriyapongsa J, Bootchai C, Ngamphiw C, Tongsima S.

PLoS One. 2012;7(3):e33888. doi: 10.1371/journal.pone.0033888. Epub 2012 Mar 16.

19.

TransmiR: a transcription factor-microRNA regulation database.

Wang J, Lu M, Qiu C, Cui Q.

Nucleic Acids Res. 2010 Jan;38(Database issue):D119-22. doi: 10.1093/nar/gkp803. Epub 2009 Sep 28.

20.

miRdSNP: a database of disease-associated SNPs and microRNA target sites on 3'UTRs of human genes.

Bruno AE, Li L, Kalabus JL, Pan Y, Yu A, Hu Z.

BMC Genomics. 2012 Jan 25;13:44. doi: 10.1186/1471-2164-13-44.

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