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Items: 1 to 20 of 65

1.

Chemical strategies to understand the language of ubiquitin signaling.

Weller CE, Pilkerton ME, Chatterjee C.

Biopolymers. 2014 Feb;101(2):144-55. doi: 10.1002/bip.22253. Review.

PMID:
23576160
2.

Unraveling the ubiquitin-regulated signaling networks by mass spectrometry-based proteomics.

Low TY, Magliozzi R, Guardavaccaro D, Heck AJ.

Proteomics. 2013 Feb;13(3-4):526-37. doi: 10.1002/pmic.201200244. Review.

PMID:
23019148
3.

The complexity of recognition of ubiquitinated substrates by the 26S proteasome.

Ciechanover A, Stanhill A.

Biochim Biophys Acta. 2014 Jan;1843(1):86-96. doi: 10.1016/j.bbamcr.2013.07.007. Review.

4.

The ubiquitin-conjugating enzyme, UbcM2, is restricted to monoubiquitylation by a two-fold mechanism that involves backside residues of E2 and Lys48 of ubiquitin.

Nguyen L, Plafker KS, Starnes A, Cook M, Klevit RE, Plafker SM.

Biochemistry. 2014 Jun 24;53(24):4004-14. doi: 10.1021/bi500072v.

5.

Semisynthesis of ubiquitylated proteins.

McGinty RK, Chatterjee C, Muir TW.

Methods Enzymol. 2009;462:225-43. doi: 10.1016/S0076-6879(09)62011-5.

PMID:
19632477
6.

Analysis of the biochemical role of Lys-11 in polyubiquitin chain formation using quantitative mass spectrometry.

Jung JW, Bae SJ, Kang GY, Kim KH, Yeo WS, Park SH, Seol JH, Yi EC, Kim KP.

Rapid Commun Mass Spectrom. 2013 Jan 30;27(2):339-46. doi: 10.1002/rcm.6447.

PMID:
23239382
7.

Facile synthesis of native and protease-resistant ubiquitylated peptides.

Weller CE, Huang W, Chatterjee C.

Chembiochem. 2014 Jun 16;15(9):1263-7. doi: 10.1002/cbic.201402135.

8.

Proteome-wide identification of ubiquitylation sites by conjugation of engineered lysine-less ubiquitin.

Oshikawa K, Matsumoto M, Oyamada K, Nakayama KI.

J Proteome Res. 2012 Feb 3;11(2):796-807. doi: 10.1021/pr200668y.

PMID:
22053931
9.

Deciphering tissue-specific ubiquitylation by mass spectrometry.

Mayor U, Peng J.

Methods Mol Biol. 2012;832:65-80. doi: 10.1007/978-1-61779-474-2_3.

10.

Incorporating distant sequence features and radial basis function networks to identify ubiquitin conjugation sites.

Lee TY, Chen SA, Hung HY, Ou YY.

PLoS One. 2011 Mar 9;6(3):e17331. doi: 10.1371/journal.pone.0017331.

11.

Ubiquitylation within signaling pathways in- and outside of inflammation.

Hochrainer K, Lipp J.

Thromb Haemost. 2007 Mar;97(3):370-7. Review.

PMID:
17334503
12.

Chemical ubiquitination for decrypting a cellular code.

Stanley M, Virdee S.

Biochem J. 2016 May 15;473(10):1297-314. doi: 10.1042/BJ20151195. Review. Erratum in: Biochem J. 2016 Jul 15;473(14):2249.

PMID:
27208213
14.

Tandem affinity purification and mass spectrometric analysis of ubiquitylated proteins in Arabidopsis.

Saracco SA, Hansson M, Scalf M, Walker JM, Smith LM, Vierstra RD.

Plant J. 2009 Jul;59(2):344-58. doi: 10.1111/j.1365-313X.2009.03862.x.

15.

Nonenzymatic polyubiquitination of expressed proteins.

Hemantha HP, Bavikar SN, Herman-Bachinsky Y, Haj-Yahya N, Bondalapati S, Ciechanover A, Brik A.

J Am Chem Soc. 2014 Feb 12;136(6):2665-73. doi: 10.1021/ja412594d.

16.

The missing links to link ubiquitin: Methods for the enzymatic production of polyubiquitin chains.

Faggiano S, Alfano C, Pastore A.

Anal Biochem. 2016 Jan 1;492:82-90. doi: 10.1016/j.ab.2015.09.013. Review.

17.

Protein monoubiquitylation: targets and diverse functions.

Nakagawa T, Nakayama K.

Genes Cells. 2015 Jul;20(7):543-62. doi: 10.1111/gtc.12250. Review.

18.

What's Ub chain linkage got to do with it?

Kim I, Rao H.

Sci STKE. 2006 Apr 11;2006(330):pe18.

PMID:
16608998
19.

Improved quantitative mass spectrometry methods for characterizing complex ubiquitin signals.

Phu L, Izrael-Tomasevic A, Matsumoto ML, Bustos D, Dynek JN, Fedorova AV, Bakalarski CE, Arnott D, Deshayes K, Dixit VM, Kelley RF, Vucic D, Kirkpatrick DS.

Mol Cell Proteomics. 2011 May;10(5):M110.003756. doi: 10.1074/mcp.M110.003756.

20.

Improving bioorthogonal protein ubiquitylation by click reaction.

Schneider D, Schneider T, Rösner D, Scheffner M, Marx A.

Bioorg Med Chem. 2013 Jun 15;21(12):3430-5. doi: 10.1016/j.bmc.2013.03.063.

PMID:
23611767
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