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Items: 1 to 20 of 135

1.

Clustering and alignment of polymorphic sequences for HLA-DRB1 genotyping.

Ringquist S, Bellone G, Lu Y, Roeder K, Trucco M.

PLoS One. 2013;8(3):e59835. doi: 10.1371/journal.pone.0059835. Epub 2013 Mar 28.

2.

Concordance of next generation sequence-based and sequence specific oligonucleotide probe-based HLA-DRB1 genotyping.

Lane JA, Johnson JR, Noble JA.

Hum Immunol. 2015 Dec;76(12):939-44. doi: 10.1016/j.humimm.2015.07.235. Epub 2015 Aug 4.

3.

HLA-DRB1, -DRB3, -DRB4 and -DRB5 genotyping at a super-high resolution level by long range PCR and high-throughput sequencing.

Ozaki Y, Suzuki S, Shigenari A, Okudaira Y, Kikkawa E, Oka A, Ota M, Mitsunaga S, Kulski JK, Inoko H, Shiina T.

Tissue Antigens. 2014 Jan;83(1):10-6. doi: 10.1111/tan.12258. Epub 2013 Nov 30.

PMID:
24355003
4.

High-resolution, high-throughput HLA genotyping by next-generation sequencing.

Bentley G, Higuchi R, Hoglund B, Goodridge D, Sayer D, Trachtenberg EA, Erlich HA.

Tissue Antigens. 2009 Nov;74(5):393-403. doi: 10.1111/j.1399-0039.2009.01345.x.

5.

A reliable, high-resolution and high-throughput genotyping method for HLA-DRB1.

Yang F, Jiang F, Chai X, Guo Y, Lan Z, Yuan Y, Huang C, Zhu Z, Li H, Du B, Wang J, Zhou L, Chen Z, Yang L, Zhou M, Zeng H, Xu Y, Wang W.

Hum Immunol. 2015 Jun;76(6):397-401. doi: 10.1016/j.humimm.2015.04.003. Epub 2015 Apr 15.

PMID:
25890007
6.

HLA class II DRB high resolution genotyping by pyrosequencing: comparison of group specific PCR and pyrosequencing primers.

Ringquist S, Alexander AM, Styche A, Pecoraro C, Rudert WA, Trucco M.

Hum Immunol. 2004 Feb;65(2):163-74.

PMID:
14969771
7.

HLA-Cw*1202-B*5201-DRB1*1502 haplotype increases risk for ulcerative colitis but reduces risk for Crohn's disease.

Okada Y, Yamazaki K, Umeno J, Takahashi A, Kumasaka N, Ashikawa K, Aoi T, Takazoe M, Matsui T, Hirano A, Matsumoto T, Kamatani N, Nakamura Y, Yamamoto K, Kubo M.

Gastroenterology. 2011 Sep;141(3):864-871.e1-5. doi: 10.1053/j.gastro.2011.05.048. Epub 2011 Jul 19.

PMID:
21699788
8.

The influence of the HLA-DRB, HLA-DQB and polymorphic positions of the HLA-DRβ1 and HLA-DQβ1 molecules on risk of Iranian type 1 diabetes mellitus patients.

Sayad A, Akbari MT, Pajouhi M, Mostafavi F, Zamani M.

Int J Immunogenet. 2012 Oct;39(5):429-36. doi: 10.1111/j.1744-313X.2012.01116.x. Epub 2012 Apr 12.

PMID:
22494469
9.

High-throughput, high-fidelity HLA genotyping with deep sequencing.

Wang C, Krishnakumar S, Wilhelmy J, Babrzadeh F, Stepanyan L, Su LF, Levinson D, Fernandez-Viña MA, Davis RW, Davis MM, Mindrinos M.

Proc Natl Acad Sci U S A. 2012 May 29;109(22):8676-81. doi: 10.1073/pnas.1206614109. Epub 2012 May 15.

10.

Cost-efficient multiplex PCR for routine genotyping of up to nine classical HLA loci in a single analytical run of multiple samples by next generation sequencing.

Ozaki Y, Suzuki S, Kashiwase K, Shigenari A, Okudaira Y, Ito S, Masuya A, Azuma F, Yabe T, Morishima S, Mitsunaga S, Satake M, Ota M, Morishima Y, Kulski JK, Saito K, Inoko H, Shiina T.

BMC Genomics. 2015 Apr 18;16:318. doi: 10.1186/s12864-015-1514-4.

11.

Inflammatory bowel disease: susceptibility and disease heterogeneity revealed by human leukocyte antigen genotyping.

Bouzid D, Kammoun A, Amouri A, Mahfoudh N, Haddouk S, Tahri N, Makni H, Masmoudi H.

Genet Test Mol Biomarkers. 2012 Jun;16(6):482-7. doi: 10.1089/gtmb.2011.0132. Epub 2012 Jan 6.

PMID:
22224635
12.

High-throughput multiplex HLA genotyping by next-generation sequencing using multi-locus individual tagging.

Ehrenberg PK, Geretz A, Baldwin KM, Apps R, Polonis VR, Robb ML, Kim JH, Michael NL, Thomas R.

BMC Genomics. 2014 Oct 6;15:864. doi: 10.1186/1471-2164-15-864.

13.

Polymerase chain reaction (PCR) and sequence specific oligonucleotide probes (SSOP) genotyping assay for detection of genes associated with rheumatoid arthritis and multiple sclerosis.

Nikolaou K, Kalatzis FG, Giannakeas N, Markoula S, Chatzikyriakidou A, Georgiou I, Fotiadis DI.

Conf Proc IEEE Eng Med Biol Soc. 2010;2010:6202-5. doi: 10.1109/IEMBS.2010.5627739.

PMID:
21097159
14.

Three novel alleles at the HLA-DRB1 locus identified by sequence-based typing.

Frison S, Longhi E, Mantovani M, Mantia M, Tagliaferri C, Di Giorgio D, Scalamogna M, Poli F.

Hum Immunol. 2012 Jan;73(1):67-9. doi: 10.1016/j.humimm.2011.11.004. Epub 2011 Nov 15.

PMID:
22119882
15.

Common and well-documented (CWD) alleles of human leukocyte antigen-A, -B, -C, -DRB1, and -DQB1 loci for the Chinese Han population do not quite correlate with the ASHI CWD alleles.

He J, Li Y, Bao X, Qiu Q, Yuan X, Xu C, Shen J, Hou J.

Hum Immunol. 2012 Jan;73(1):61-6. doi: 10.1016/j.humimm.2011.06.005. Epub 2011 Jun 15.

PMID:
21712058
16.

High throughput HLA genotyping using 454 sequencing and the Fluidigm Access Array™ System for simplified amplicon library preparation.

Moonsamy PV, Williams T, Bonella P, Holcomb CL, Höglund BN, Hillman G, Goodridge D, Turenchalk GS, Blake LA, Daigle DA, Simen BB, Hamilton A, May AP, Erlich HA.

Tissue Antigens. 2013 Mar;81(3):141-9. doi: 10.1111/tan.12071.

PMID:
23398507
17.

A multi-site study using high-resolution HLA genotyping by next generation sequencing.

Holcomb CL, Höglund B, Anderson MW, Blake LA, Böhme I, Egholm M, Ferriola D, Gabriel C, Gelber SE, Goodridge D, Hawbecker S, Klein R, Ladner M, Lind C, Monos D, Pando MJ, Pröll J, Sayer DC, Schmitz-Agheguian G, Simen BB, Thiele B, Trachtenberg EA, Tyan DB, Wassmuth R, White S, Erlich HA.

Tissue Antigens. 2011 Mar;77(3):206-17. doi: 10.1111/j.1399-0039.2010.01606.x.

18.

Use of PCR with sequence-specific primers for high-resolution human leukocyte antigen typing of patients with narcolepsy.

Woo HI, Joo EY, Hong SB, Lee KW, Kang ES.

Ann Lab Med. 2012 Jan;32(1):57-65. doi: 10.3343/alm.2012.32.1.57. Epub 2011 Dec 20.

19.

Difference in DRB1* gene polymorphisms between Han and Uyghur ulcerative colitis patients in China.

Aheman A, Gao F, Kuerbanjiang A, Li YX, Abuduhadeer M.

World J Gastroenterol. 2013 May 7;19(17):2709-13. doi: 10.3748/wjg.v19.i17.2709.

20.

Ultra-high resolution HLA genotyping and allele discovery by highly multiplexed cDNA amplicon pyrosequencing.

Lank SM, Golbach BA, Creager HM, Wiseman RW, Keskin DB, Reinherz EL, Brusic V, O'Connor DH.

BMC Genomics. 2012 Aug 6;13:378. doi: 10.1186/1471-2164-13-378.

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