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Items: 1 to 20 of 106

1.

Amino acid substitutions in cold-adapted proteins from Halorubrum lacusprofundi, an extremely halophilic microbe from antarctica.

Dassarma S, Capes MD, Karan R, Dassarma P.

PLoS One. 2013;8(3):e58587. doi: 10.1371/journal.pone.0058587. Epub 2013 Mar 11.

2.
3.

Cold adaptation of the Antarctic haloarchaea Halohasta litchfieldiae and Halorubrum lacusprofundi.

Williams TJ, Liao Y, Ye J, Kuchel RP, Poljak A, Raftery MJ, Cavicchioli R.

Environ Microbiol. 2017 Jun;19(6):2210-2227. doi: 10.1111/1462-2920.13705. Epub 2017 Mar 28.

PMID:
28217912
4.

Key amino acid residues conferring enhanced enzyme activity at cold temperatures in an Antarctic polyextremophilic β-galactosidase.

Laye VJ, Karan R, Kim JM, Pecher WT, DasSarma P, DasSarma S.

Proc Natl Acad Sci U S A. 2017 Nov 21;114(47):12530-12535. doi: 10.1073/pnas.1711542114. Epub 2017 Nov 6.

PMID:
29109294
5.

Ecophysiological Distinctions of Haloarchaea from a Hypersaline Antarctic Lake as Determined by Metaproteomics.

Tschitschko B, Williams TJ, Allen MA, Zhong L, Raftery MJ, Cavicchioli R.

Appl Environ Microbiol. 2016 May 16;82(11):3165-73. doi: 10.1128/AEM.00473-16. Print 2016 Jun 1.

6.

Complete genome sequence of the Antarctic Halorubrum lacusprofundi type strain ACAM 34.

Anderson IJ, DasSarma P, Lucas S, Copeland A, Lapidus A, Del Rio TG, Tice H, Dalin E, Bruce DC, Goodwin L, Pitluck S, Sims D, Brettin TS, Detter JC, Han CS, Larimer F, Hauser L, Land M, Ivanova N, Richardson P, Cavicchioli R, DasSarma S, Woese CR, Kyrpides NC.

Stand Genomic Sci. 2016 Sep 10;11(1):70. doi: 10.1186/s40793-016-0194-2. eCollection 2016.

7.

Microbial ecology of an Antarctic hypersaline lake: genomic assessment of ecophysiology among dominant haloarchaea.

Williams TJ, Allen MA, DeMaere MZ, Kyrpides NC, Tringe SG, Woyke T, Cavicchioli R.

ISME J. 2014 Aug;8(8):1645-58. doi: 10.1038/ismej.2014.18. Epub 2014 Feb 20. Erratum in: ISME J. 2014 Aug;8(8):1752.

8.

Low-pass sequencing for microbial comparative genomics.

Goo YA, Roach J, Glusman G, Baliga NS, Deutsch K, Pan M, Kennedy S, DasSarma S, Ng WV, Hood L.

BMC Genomics. 2004 Jan 12;5(1):3.

9.

Draft genome sequence of Halorubrum halophilum B8(T), an extremely halophilic archaeon isolated from salt-fermented seafood.

Lee HW, Yim KJ, Song HS, Nam YD, Choi HJ, Seo MJ, Kim KN, Kim D, Roh SW, Rhee JK.

Mar Genomics. 2014 Dec;18 Pt B:117-8. doi: 10.1016/j.margen.2014.08.005. Epub 2014 Aug 30.

PMID:
25180775
10.

Mechanisms of thermal adaptation revealed from the genomes of the Antarctic Archaea Methanogenium frigidum and Methanococcoides burtonii.

Saunders NF, Thomas T, Curmi PM, Mattick JS, Kuczek E, Slade R, Davis J, Franzmann PD, Boone D, Rusterholtz K, Feldman R, Gates C, Bench S, Sowers K, Kadner K, Aerts A, Dehal P, Detter C, Glavina T, Lucas S, Richardson P, Larimer F, Hauser L, Land M, Cavicchioli R.

Genome Res. 2003 Jul;13(7):1580-8. Epub 2003 Jun 12.

11.
12.

Exchange of active site residues alters substrate specificity in extremely thermostable β-glycosidase from Thermococcus kodakarensis KOD1.

Hwa KY, Subramani B, Shen ST, Lee YM.

Enzyme Microb Technol. 2015 Sep;77:14-20. doi: 10.1016/j.enzmictec.2015.05.002. Epub 2015 May 18.

PMID:
26138395
13.

Structure and function of cold shock proteins in archaea.

Giaquinto L, Curmi PM, Siddiqui KS, Poljak A, DeLong E, DasSarma S, Cavicchioli R.

J Bacteriol. 2007 Aug;189(15):5738-48. Epub 2007 Jun 1.

14.

Halorubrum persicum sp. nov., an extremely halophilic archaeon isolated from sediment of a hypersaline lake.

Corral P, de la Haba RR, Sánchez-Porro C, Amoozegar MA, Papke RT, Ventosa A.

Int J Syst Evol Microbiol. 2015 Jun;65(Pt 6):1770-8. doi: 10.1099/ijs.0.000175. Epub 2015 Mar 5.

PMID:
25744586
15.

The core and unique proteins of haloarchaea.

Capes MD, DasSarma P, DasSarma S.

BMC Genomics. 2012 Jan 24;13:39. doi: 10.1186/1471-2164-13-39.

16.

Cold adaptation of the mononuclear molybdoenzyme periplasmic nitrate reductase from the Antarctic bacterium Shewanella gelidimarina.

Simpson PJ, Codd R.

Biochem Biophys Res Commun. 2011 Nov 4;414(4):783-8. doi: 10.1016/j.bbrc.2011.10.003. Epub 2011 Oct 7.

PMID:
22005463
17.

Adaptation of model proteins from cold to hot environments involves continuous and small adjustments of average parameters related to amino acid composition.

De Vendittis E, Castellano I, Cotugno R, Ruocco MR, Raimo G, Masullo M.

J Theor Biol. 2008 Jan 7;250(1):156-71. Epub 2007 Sep 14.

PMID:
17950361
18.

Halorubrum halophilum sp. nov., an extremely halophilic archaeon isolated from a salt-fermented seafood.

Yim KJ, Cha IT, Lee HW, Song HS, Kim KN, Lee SJ, Nam YD, Hyun DW, Bae JW, Rhee SK, Seo MJ, Choi JS, Choi HJ, Roh SW, Kim D.

Antonie Van Leeuwenhoek. 2014 Mar;105(3):603-12. doi: 10.1007/s10482-014-0115-6. Epub 2014 Jan 18.

PMID:
24442192
19.

Cold-adapted beta-galactosidase from the Antarctic psychrophile Pseudoalteromonas haloplanktis.

Hoyoux A, Jennes I, Dubois P, Genicot S, Dubail F, François JM, Baise E, Feller G, Gerday C.

Appl Environ Microbiol. 2001 Apr;67(4):1529-35.

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