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Items: 1 to 20 of 99

1.

Enhancers: five essential questions.

Pennacchio LA, Bickmore W, Dean A, Nobrega MA, Bejerano G.

Nat Rev Genet. 2013 Apr;14(4):288-95. doi: 10.1038/nrg3458.

2.

An atlas of active enhancers across human cell types and tissues.

Andersson R, Gebhard C, Miguel-Escalada I, Hoof I, Bornholdt J, Boyd M, Chen Y, Zhao X, Schmidl C, Suzuki T, Ntini E, Arner E, Valen E, Li K, Schwarzfischer L, Glatz D, Raithel J, Lilje B, Rapin N, Bagger FO, Jørgensen M, Andersen PR, Bertin N, Rackham O, Burroughs AM, Baillie JK, Ishizu Y, Shimizu Y, Furuhata E, Maeda S, Negishi Y, Mungall CJ, Meehan TF, Lassmann T, Itoh M, Kawaji H, Kondo N, Kawai J, Lennartsson A, Daub CO, Heutink P, Hume DA, Jensen TH, Suzuki H, Hayashizaki Y, Müller F; FANTOM Consortium, Forrest AR, Carninci P, Rehli M, Sandelin A.

Nature. 2014 Mar 27;507(7493):455-61. doi: 10.1038/nature12787.

PMID:
24670763
3.

Topology of mammalian developmental enhancers and their regulatory landscapes.

de Laat W, Duboule D.

Nature. 2013 Oct 24;502(7472):499-506. doi: 10.1038/nature12753. Review.

PMID:
24153303
4.

Enhancer-core-promoter specificity separates developmental and housekeeping gene regulation.

Zabidi MA, Arnold CD, Schernhuber K, Pagani M, Rath M, Frank O, Stark A.

Nature. 2015 Feb 26;518(7540):556-9. doi: 10.1038/nature13994. Epub 2014 Dec 15.

PMID:
25517091
5.
6.

Evolution of Alu elements toward enhancers.

Su M, Han D, Boyd-Kirkup J, Yu X, Han JD.

Cell Rep. 2014 Apr 24;7(2):376-85. doi: 10.1016/j.celrep.2014.03.011. Epub 2014 Apr 3.

7.

Characterization of genome-wide enhancer-promoter interactions reveals co-expression of interacting genes and modes of higher order chromatin organization.

Chepelev I, Wei G, Wangsa D, Tang Q, Zhao K.

Cell Res. 2012 Mar;22(3):490-503. doi: 10.1038/cr.2012.15. Epub 2012 Jan 24.

8.

Enhancers: holding out for the right promoter.

Lorberbaum DS, Barolo S.

Curr Biol. 2015 Mar 30;25(7):R290-3. doi: 10.1016/j.cub.2015.01.039.

9.

Genomic views of distant-acting enhancers.

Visel A, Rubin EM, Pennacchio LA.

Nature. 2009 Sep 10;461(7261):199-205. doi: 10.1038/nature08451. Review.

10.

Eukaryotic enhancers: common features, regulation, and participation in diseases.

Erokhin M, Vassetzky Y, Georgiev P, Chetverina D.

Cell Mol Life Sci. 2015 Jun;72(12):2361-75. doi: 10.1007/s00018-015-1871-9. Epub 2015 Feb 26. Review.

PMID:
25715743
11.

Genomic Views of Transcriptional Enhancers: Essential Determinants of Cellular Identity and Activity-Dependent Responses in the CNS.

Gray JM, Kim TK, West AE, Nord AS, Markenscoff-Papadimitriou E, Lomvardas S.

J Neurosci. 2015 Oct 14;35(41):13819-26. doi: 10.1523/JNEUROSCI.2622-15.2015. Review.

13.

Evolutionary genomics. Evolutionary changes in promoter and enhancer activity during human corticogenesis.

Reilly SK, Yin J, Ayoub AE, Emera D, Leng J, Cotney J, Sarro R, Rakic P, Noonan JP.

Science. 2015 Mar 6;347(6226):1155-9. doi: 10.1126/science.1260943.

14.

Chromatin insulators and long-distance interactions in Drosophila.

Kyrchanova O, Georgiev P.

FEBS Lett. 2014 Jan 3;588(1):8-14. doi: 10.1016/j.febslet.2013.10.039. Epub 2013 Nov 5. Review.

15.

Interaction between zeste binding sites does not block isolated yellow enhancers in Drosophila melanogaster.

Zobacheva PY, Kulliev AP, Georgiev PG, Mel'nikova LS.

Dokl Biochem Biophys. 2003 Jul-Aug;391:229-31. No abstract available.

PMID:
14531075
16.

Cis-regulatory elements: molecular mechanisms and evolutionary processes underlying divergence.

Wittkopp PJ, Kalay G.

Nat Rev Genet. 2011 Dec 6;13(1):59-69. doi: 10.1038/nrg3095. Review.

PMID:
22143240
17.

Enhancer turnover and conserved regulatory function in vertebrate evolution.

Domené S, Bumaschny VF, de Souza FS, Franchini LF, Nasif S, Low MJ, Rubinstein M.

Philos Trans R Soc Lond B Biol Sci. 2013 Nov 11;368(1632):20130027. doi: 10.1098/rstb.2013.0027. Print 2013 Dec 19.

18.

Locus-specific editing of histone modifications at endogenous enhancers.

Mendenhall EM, Williamson KE, Reyon D, Zou JY, Ram O, Joung JK, Bernstein BE.

Nat Biotechnol. 2013 Dec;31(12):1133-6. doi: 10.1038/nbt.2701. Epub 2013 Sep 8.

19.

The immunoglobulin heavy-chain gene 3' enhancers deregulate bcl-2 promoter usage in t(14;18) lymphoma cells.

Duan H, Heckman CA, Boxer LM.

Oncogene. 2007 Apr 19;26(18):2635-41. Epub 2006 Oct 16.

PMID:
17043638
20.

Genome organization and long-range regulation of gene expression by enhancers.

Smallwood A, Ren B.

Curr Opin Cell Biol. 2013 Jun;25(3):387-94. doi: 10.1016/j.ceb.2013.02.005. Epub 2013 Mar 4. Review.

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