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Items: 1 to 20 of 98

1.

Walking motion of an overdamped active particle in a ratchet potential.

Lee KJ, Kim CK, Chung MH.

J Biol Phys. 2012 Mar;38(2):305-16. doi: 10.1007/s10867-011-9249-1. Epub 2011 Dec 2.

2.

A modified active Brownian dynamics model using asymmetric energy conversion and its application to the molecular motor system.

Park PJ, Lee KJ.

J Biol Phys. 2013 Jun;39(3):439-52. doi: 10.1007/s10867-013-9300-5. Epub 2013 Mar 2.

3.

Computational modeling of kinesin stepping.

Khataee H, Liew AW.

J Chem Inf Model. 2014 Dec 22;54(12):3439-45. doi: 10.1021/ci500673z. Epub 2014 Nov 25.

PMID:
25400227
4.

Single molecule processes on the stepwise movement of ATP-driven molecular motors.

Nishiyama M, Higuchi H, Ishii Y, Taniguchi Y, Yanagida T.

Biosystems. 2003 Sep;71(1-2):145-56.

PMID:
14568215
5.

A mathematical model describing the mechanical kinetics of kinesin stepping.

Khataee H, Wee-Chung Liew A.

Bioinformatics. 2014 Feb 1;30(3):353-9. doi: 10.1093/bioinformatics/btt698. Epub 2013 Nov 30.

PMID:
24292938
6.

Force generation in kinesin hinges on cover-neck bundle formation.

Hwang W, Lang MJ, Karplus M.

Structure. 2008 Jan;16(1):62-71. doi: 10.1016/j.str.2007.11.008. Erratum in: Structure. 2008 Jul;16(7):1147.

7.

The forward and backward stepping processes of kinesin are gated by ATP binding.

Taniguchi Y, Yanagida T.

Biophysics (Nagoya-shi). 2008 Oct 15;4:11-18. eCollection 2008.

8.

On the hand-over-hand mechanism of kinesin.

Shao Q, Gao YQ.

Proc Natl Acad Sci U S A. 2006 May 23;103(21):8072-7. Epub 2006 May 12.

9.

Collective dynamics of kinesin.

Hendricks AG, Epureanu BI, Meyhöfer E.

Phys Rev E Stat Nonlin Soft Matter Phys. 2009 Mar;79(3 Pt 1):031929. Epub 2009 Mar 31.

PMID:
19391993
10.

Three phase model of the processive motor protein kinesin.

Zhang Y.

Biophys Chem. 2008 Jul;136(1):19-22. doi: 10.1016/j.bpc.2008.04.002. Epub 2008 Apr 11.

PMID:
18456386
11.

Stepping behavior of two-headed kinesin motors.

Xie P.

Biochim Biophys Acta. 2008 Sep;1777(9):1195-202. doi: 10.1016/j.bbabio.2008.04.040. Epub 2008 May 1.

12.
13.

Molecular motors: how to make models that can be used to convey the concept of molecular ratchets and thermal capture.

DoHarris L, Giesler A, Humber B, Sukumar A, Janssen LJ.

Adv Physiol Educ. 2011 Jun;35(2):213-8. doi: 10.1152/advan.00107.2010.

14.

Force generation by granular chains moving randomly on periodic ratchet plates.

Chen K, Chou YC, To K.

Phys Rev E Stat Nonlin Soft Matter Phys. 2013 Jan;87(1):012711. Epub 2013 Jan 17.

PMID:
23410363
15.

Understanding molecular motor walking along a microtubule: a themosensitive asymmetric Brownian motor driven by bubble formation.

Arai N, Yasuoka K, Koishi T, Ebisuzaki T, Zeng XC.

J Am Chem Soc. 2013 Jun 12;135(23):8616-24. doi: 10.1021/ja402014u. Epub 2013 May 30.

PMID:
23721590
16.

A stochastic automaton model for simulating kinesin processivity.

Khataee H, Liew AW.

Bioinformatics. 2015 Feb 1;31(3):390-6. doi: 10.1093/bioinformatics/btu664. Epub 2014 Oct 9.

PMID:
25304779
17.

Detection of fractional steps in cargo movement by the collective operation of kinesin-1 motors.

Leduc C, Ruhnow F, Howard J, Diez S.

Proc Natl Acad Sci U S A. 2007 Jun 26;104(26):10847-52. Epub 2007 Jun 14.

18.

Molecular motors: thermodynamics and the random walk.

Thomas N, Imafuku Y, Tawada K.

Proc Biol Sci. 2001 Oct 22;268(1481):2113-22. Review.

19.

The neck linker of kinesin 1 seems optimally designed to approach the largest stepping velocity: a simulation study of an ideal model.

Shu YG, Zhang XH, Ou-Yang ZC, Li M.

J Phys Condens Matter. 2012 Jan 25;24(3):035105. doi: 10.1088/0953-8984/24/3/035105. Epub 2011 Dec 16.

PMID:
22173184
20.

Collective dynamics of interacting molecular motors.

Campàs O, Kafri Y, Zeldovich KB, Casademunt J, Joanny JF.

Phys Rev Lett. 2006 Jul 21;97(3):038101. Epub 2006 Jul 19. Review.

PMID:
16907545

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