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Items: 1 to 20 of 136

1.

Encoding anatomy: developmental gene regulatory networks and morphogenesis.

Ettensohn CA.

Genesis. 2013 Jun;51(6):383-409. doi: 10.1002/dvg.22380. Epub 2013 Mar 28. Review.

PMID:
23436627
2.

The genomic regulatory control of skeletal morphogenesis in the sea urchin.

Rafiq K, Cheers MS, Ettensohn CA.

Development. 2012 Feb;139(3):579-90. doi: 10.1242/dev.073049. Epub 2011 Dec 21.

3.

Genome-wide analysis of the skeletogenic gene regulatory network of sea urchins.

Rafiq K, Shashikant T, McManus CJ, Ettensohn CA.

Development. 2014 Feb;141(4):950-61. doi: 10.1242/dev.105585. Erratum in: Development. 2014 Jun;141(12):2542.

4.

Juvenile skeletogenesis in anciently diverged sea urchin clades.

Gao F, Thompson JR, Petsios E, Erkenbrack E, Moats RA, Bottjer DJ, Davidson EH.

Dev Biol. 2015 Apr 1;400(1):148-58. doi: 10.1016/j.ydbio.2015.01.017. Epub 2015 Jan 30.

5.

A protocol for unraveling gene regulatory networks.

Materna SC, Oliveri P.

Nat Protoc. 2008;3(12):1876-87. doi: 10.1038/nprot.2008.187.

PMID:
19008874
6.

Linking chordate gene networks to cellular behavior in ascidians.

Davidson B, Christiaen L.

Cell. 2006 Jan 27;124(2):247-50. Review.

7.

A systems biology approach to developmental toxicology.

Cummings A, Kavlock R.

Reprod Toxicol. 2005 Jan-Feb;19(3):281-90. Review.

PMID:
15686864
8.
9.

Gene regulatory networks and developmental plasticity in the early sea urchin embryo: alternative deployment of the skeletogenic gene regulatory network.

Ettensohn CA, Kitazawa C, Cheers MS, Leonard JD, Sharma T.

Development. 2007 Sep;134(17):3077-87. Epub 2007 Aug 1.

10.

Deployment of a retinal determination gene network drives directed cell migration in the sea urchin embryo.

Martik ML, McClay DR.

Elife. 2015 Sep 24;4. pii: e08827. doi: 10.7554/eLife.08827.

11.

A conserved gene regulatory network subcircuit drives different developmental fates in the vegetal pole of highly divergent echinoderm embryos.

McCauley BS, Weideman EP, Hinman VF.

Dev Biol. 2010 Apr 15;340(2):200-8. doi: 10.1016/j.ydbio.2009.11.020. Epub 2009 Nov 23.

12.

Evolutionary crossroads in developmental biology: sea urchins.

McClay DR.

Development. 2011 Jul;138(13):2639-48. doi: 10.1242/dev.048967. Review.

13.

Sea Urchin Morphogenesis.

McClay DR.

Curr Top Dev Biol. 2016;117:15-29. doi: 10.1016/bs.ctdb.2015.11.003. Epub 2016 Jan 7. Review.

PMID:
26969970
14.
15.

Regulative deployment of the skeletogenic gene regulatory network during sea urchin development.

Sharma T, Ettensohn CA.

Development. 2011 Jun;138(12):2581-90. doi: 10.1242/dev.065193.

16.

A genomic regulatory network for development.

Davidson EH, Rast JP, Oliveri P, Ransick A, Calestani C, Yuh CH, Minokawa T, Amore G, Hinman V, Arenas-Mena C, Otim O, Brown CT, Livi CB, Lee PY, Revilla R, Rust AG, Pan Zj, Schilstra MJ, Clarke PJ, Arnone MI, Rowen L, Cameron RA, McClay DR, Hood L, Bolouri H.

Science. 2002 Mar 1;295(5560):1669-78. Review.

PMID:
11872831
17.

Developmental gene regulatory network evolution: insights from comparative studies in echinoderms.

Hinman VF, Cheatle Jarvela AM.

Genesis. 2014 Mar;52(3):193-207. doi: 10.1002/dvg.22757. Epub 2014 Mar 6. Review.

PMID:
24549884
18.
19.

Practical tips for imaging ascidian embryos.

Negishi T, McDougall A, Yasuo H.

Dev Growth Differ. 2013 May;55(4):446-53. doi: 10.1111/dgd.12059. Epub 2013 Apr 24. Review.

PMID:
23611302
20.

Comparative Developmental Transcriptomics Reveals Rewiring of a Highly Conserved Gene Regulatory Network during a Major Life History Switch in the Sea Urchin Genus Heliocidaris.

Israel JW, Martik ML, Byrne M, Raff EC, Raff RA, McClay DR, Wray GA.

PLoS Biol. 2016 Mar 4;14(3):e1002391. doi: 10.1371/journal.pbio.1002391. eCollection 2016 Mar. Erratum in: PLoS Biol. 2016 Jun;14(6):e1002489.

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