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Items: 1 to 20 of 91

1.

Tertiary structure-based analysis of microRNA-target interactions.

Gan HH, Gunsalus KC.

RNA. 2013 Apr;19(4):539-51. doi: 10.1261/rna.035691.112.

2.

Assembly and analysis of eukaryotic Argonaute-RNA complexes in microRNA-target recognition.

Gan HH, Gunsalus KC.

Nucleic Acids Res. 2015 Nov 16;43(20):9613-25. doi: 10.1093/nar/gkv990.

3.
4.

Potent effect of target structure on microRNA function.

Long D, Lee R, Williams P, Chan CY, Ambros V, Ding Y.

Nat Struct Mol Biol. 2007 Apr;14(4):287-94.

PMID:
17401373
5.

Computational analysis of microRNA targets in Caenorhabditis elegans.

Watanabe Y, Yachie N, Numata K, Saito R, Kanai A, Tomita M.

Gene. 2006 Jan 3;365:2-10.

PMID:
16356665
6.

Two molecular features contribute to the Argonaute specificity for the microRNA and RNAi pathways in C. elegans.

Jannot G, Boisvert ME, Banville IH, Simard MJ.

RNA. 2008 May;14(5):829-35. doi: 10.1261/rna.901908.

7.

Predicting kissing interactions in microRNA-target complex and assessment of microRNA activity.

Cao S, Chen SJ.

Nucleic Acids Res. 2012 May;40(10):4681-90. doi: 10.1093/nar/gks052.

8.

Solution structure of miRNA:mRNA complex.

Cevec M, Plavec J.

Methods Mol Biol. 2010;667:251-65. doi: 10.1007/978-1-60761-811-9_17.

PMID:
20827539
9.

Functional small RNAs are generated from select miRNA hairpin loops in flies and mammals.

Okamura K, Ladewig E, Zhou L, Lai EC.

Genes Dev. 2013 Apr 1;27(7):778-92. doi: 10.1101/gad.211698.112.

10.

ARGONAUTE PIWI domain and microRNA duplex structure regulate small RNA sorting in Arabidopsis.

Zhang X, Niu D, Carbonell A, Wang A, Lee A, Tun V, Wang Z, Carrington JC, Chang CE, Jin H.

Nat Commun. 2014 Nov 19;5:5468. doi: 10.1038/ncomms6468.

11.

Large domain motions in Ago protein controlled by the guide DNA-strand seed region determine the Ago-DNA-mRNA complex recognition process.

Xia Z, Huynh T, Ren P, Zhou R.

PLoS One. 2013;8(1):e54620. doi: 10.1371/journal.pone.0054620. Erratum in: PLoS One. 2013;8(8). doi:10.1371/annotation/dc754ef5-000d-4362-be14-e8b04d5e77e1.

12.

The role of site accessibility in microRNA target recognition.

Kertesz M, Iovino N, Unnerstall U, Gaul U, Segal E.

Nat Genet. 2007 Oct;39(10):1278-84.

PMID:
17893677
13.

Autoregulation of microRNA biogenesis by let-7 and Argonaute.

Zisoulis DG, Kai ZS, Chang RK, Pasquinelli AE.

Nature. 2012 Jun 28;486(7404):541-4. doi: 10.1038/nature11134.

14.

Solution structure of a let-7 miRNA:lin-41 mRNA complex from C. elegans.

Cevec M, Thibaudeau C, Plavec J.

Nucleic Acids Res. 2008 Apr;36(7):2330-7. doi: 10.1093/nar/gkn088.

15.

Identifying Argonaute binding sites in Caenorhabditis elegans using iCLIP.

Broughton JP, Pasquinelli AE.

Methods. 2013 Sep 15;63(2):119-25. doi: 10.1016/j.ymeth.2013.03.033.

16.

Molecular architecture of a miRNA-regulated 3' UTR.

Didiano D, Hobert O.

RNA. 2008 Jul;14(7):1297-317. doi: 10.1261/rna.1082708.

17.

Dynamic anchoring of the 3'-end of the guide strand controls the target dissociation of Argonaute-guide complex.

Jung SR, Kim E, Hwang W, Shin S, Song JJ, Hohng S.

J Am Chem Soc. 2013 Nov 13;135(45):16865-71. doi: 10.1021/ja403138d.

PMID:
24175926
18.

Sampling the structure of the noncanonical lin-4:lin-14 microRNA:mRNA complex by molecular dynamics simulations.

Balasubramanian C, Ojha RP, Maiti S, Desideri A.

J Phys Chem B. 2010 Dec 16;114(49):16443-9. doi: 10.1021/jp104193r.

PMID:
21090710
19.

The slicing activity of miRNA-specific Argonautes is essential for the miRNA pathway in C. elegans.

Bouasker S, Simard MJ.

Nucleic Acids Res. 2012 Nov 1;40(20):10452-62. doi: 10.1093/nar/gks748.

20.

The conformation of microRNA seed regions in native microRNPs is prearranged for presentation to mRNA targets.

Lambert NJ, Gu SG, Zahler AM.

Nucleic Acids Res. 2011 Jun;39(11):4827-35. doi: 10.1093/nar/gkr077.

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