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Items: 1 to 20 of 186


Characterization of the global transcriptome for Pyropia haitanensis (Bangiales, Rhodophyta) and development of cSSR markers.

Xie C, Li B, Xu Y, Ji D, Chen C.

BMC Genomics. 2013 Feb 16;14:107. doi: 10.1186/1471-2164-14-107.


De novo assembly and characterization of root transcriptome using Illumina paired-end sequencing and development of cSSR markers in sweet potato (Ipomoea batatas).

Wang Z, Fang B, Chen J, Zhang X, Luo Z, Huang L, Chen X, Li Y.

BMC Genomics. 2010 Dec 24;11:726. doi: 10.1186/1471-2164-11-726.


Genome-wide expression profiles of Pyropia haitanensis in response to osmotic stress by using deep sequencing technology.

Wang L, Mao Y, Kong F, Cao M, Sun P.

BMC Genomics. 2015 Nov 26;16:1012. doi: 10.1186/s12864-015-2226-5.


Characterization of the sesame (Sesamum indicum L.) global transcriptome using Illumina paired-end sequencing and development of EST-SSR markers.

Wei W, Qi X, Wang L, Zhang Y, Hua W, Li D, Lv H, Zhang X.

BMC Genomics. 2011 Sep 19;12:451. doi: 10.1186/1471-2164-12-451.


De novo assembly and characterization of the global transcriptome for Rhyacionia leptotubula using Illumina paired-end sequencing.

Zhu JY, Li YH, Yang S, Li QW.

PLoS One. 2013 Nov 21;8(11):e81096. doi: 10.1371/journal.pone.0081096. eCollection 2013.


Transcriptome analysis of the roots at early and late seedling stages using Illumina paired-end sequencing and development of EST-SSR markers in radish.

Wang S, Wang X, He Q, Liu X, Xu W, Li L, Gao J, Wang F.

Plant Cell Rep. 2012 Aug;31(8):1437-47. doi: 10.1007/s00299-012-1259-3. Epub 2012 Apr 4.


Transcriptome analysis of Houttuynia cordata Thunb. by Illumina paired-end RNA sequencing and SSR marker discovery.

Wei L, Li S, Liu S, He A, Wang D, Wang J, Tang Y, Wu X.

PLoS One. 2014 Jan 2;9(1):e84105. doi: 10.1371/journal.pone.0084105. eCollection 2014.


De Novo Transcriptome Assembly of the Chinese Swamp Buffalo by RNA Sequencing and SSR Marker Discovery.

Deng T, Pang C, Lu X, Zhu P, Duan A, Tan Z, Huang J, Li H, Chen M, Liang X.

PLoS One. 2016 Jan 14;11(1):e0147132. doi: 10.1371/journal.pone.0147132. eCollection 2016.


De novo sequencing analysis of the Rosa roxburghii fruit transcriptome reveals putative ascorbate biosynthetic genes and EST-SSR markers.

Yan X, Zhang X, Lu M, He Y, An H.

Gene. 2015 Apr 25;561(1):54-62. doi: 10.1016/j.gene.2015.02.054. Epub 2015 Feb 19.


De novo assembly, gene annotation and marker development using Illumina paired-end transcriptome sequences in celery (Apium graveolens L.).

Fu N, Wang Q, Shen HL.

PLoS One. 2013;8(2):e57686. doi: 10.1371/journal.pone.0057686. Epub 2013 Feb 28.


De novo assembly of transcriptome sequencing in Caragana korshinskii Kom. and characterization of EST-SSR markers.

Long Y, Wang Y, Wu S, Wang J, Tian X, Pei X.

PLoS One. 2015 Jan 28;10(1):e0115805. doi: 10.1371/journal.pone.0115805. eCollection 2015.


De novo Assembly, Characterization of Immature Seed Transcriptome and Development of Genic-SSR Markers in Black Gram [Vigna mungo (L.) Hepper].

Souframanien J, Reddy KS.

PLoS One. 2015 Jun 4;10(6):e0128748. doi: 10.1371/journal.pone.0128748. eCollection 2015.


De novo sequencing and analysis of the cranberry fruit transcriptome to identify putative genes involved in flavonoid biosynthesis, transport and regulation.

Sun H, Liu Y, Gai Y, Geng J, Chen L, Liu H, Kang L, Tian Y, Li Y.

BMC Genomics. 2015 Sep 2;16:652. doi: 10.1186/s12864-015-1842-4.


De Novo Assembly and Annotation of the Chinese Chive (Allium tuberosum Rottler ex Spr.) Transcriptome Using the Illumina Platform.

Zhou SM, Chen LM, Liu SQ, Wang XF, Sun XD.

PLoS One. 2015 Jul 23;10(7):e0133312. doi: 10.1371/journal.pone.0133312. eCollection 2015.


Characterization of the transcriptome and EST-SSR development in Boea clarkeana, a desiccation-tolerant plant endemic to China.

Wang Y, Liu K, Bi, Zhou S, Shao J.

PeerJ. 2017 Jun 15;5:e3422. doi: 10.7717/peerj.3422. eCollection 2017.


Transcriptome de novo assembly sequencing and analysis of the toxic dinoflagellate Alexandrium catenella using the Illumina platform.

Zhang S, Sui Z, Chang L, Kang K, Ma J, Kong F, Zhou W, Wang J, Guo L, Geng H, Zhong J, Ma Q.

Gene. 2014 Mar 10;537(2):285-93. doi: 10.1016/j.gene.2013.12.041. Epub 2014 Jan 15.


Large scale in-silico identification and characterization of simple sequence repeats (SSRs) from de novo assembled transcriptome of Catharanthus roseus (L.) G. Don.

Kumar S, Shah N, Garg V, Bhatia S.

Plant Cell Rep. 2014 Jun;33(6):905-18. doi: 10.1007/s00299-014-1569-8. Epub 2014 Feb 1.


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