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Items: 1 to 20 of 129

1.

Applications of selected reaction monitoring (SRM)-mass spectrometry (MS) for quantitative measurement of signaling pathways.

Zhao Y, Brasier AR.

Methods. 2013 Jun 15;61(3):313-22. doi: 10.1016/j.ymeth.2013.02.001. Epub 2013 Feb 11.

2.

Quantitation of the dynamic profiles of the innate immune response using multiplex selected reaction monitoring-mass spectrometry.

Zhao Y, Tian B, Edeh CB, Brasier AR.

Mol Cell Proteomics. 2013 Jun;12(6):1513-29. doi: 10.1074/mcp.M112.023465. Epub 2013 Feb 15.

3.

Quantification of activated NF-kappaB/RelA complexes using ssDNA aptamer affinity-stable isotope dilution-selected reaction monitoring-mass spectrometry.

Zhao Y, Widen SG, Jamaluddin M, Tian B, Wood TG, Edeh CB, Brasier AR.

Mol Cell Proteomics. 2011 Jun;10(6):M111.008771. doi: 10.1074/mcp.M111.008771. Epub 2011 Apr 18.

4.

Constrained selected reaction monitoring: quantification of selected post-translational modifications and protein isoforms.

Liu X, Jin Z, O'Brien R, Bathon J, Dietz HC, Grote E, Van Eyk JE.

Methods. 2013 Jun 15;61(3):304-12. doi: 10.1016/j.ymeth.2013.03.006. Epub 2013 Mar 22.

5.

Multi-peptide nLC-PC-IDMS-SRM-based assay for the quantification of biomarkers in the chicken ovarian cancer model.

Andrews Kingon GL, Petitte JN, Muddiman DC, Hawkridge AM.

Methods. 2013 Jun 15;61(3):323-30. doi: 10.1016/j.ymeth.2013.04.004. Epub 2013 Apr 19.

6.

Label-free quantitation of protein modifications by pseudo selected reaction monitoring with internal reference peptides.

Sherrod SD, Myers MV, Li M, Myers JS, Carpenter KL, Maclean B, Maccoss MJ, Liebler DC, Ham AJ.

J Proteome Res. 2012 Jun 1;11(6):3467-79. doi: 10.1021/pr201240a. Epub 2012 May 17.

7.

Determination of selected reaction monitoring peptide transitions via multiplexed product-ion scan modes.

Cho BK, Koo YD, Kim K, Kang MJ, Lee YY, Kim Y, Park KS, Kim KP, Yi EC.

Rapid Commun Mass Spectrom. 2014 Apr 15;28(7):773-80. doi: 10.1002/rcm.6837.

PMID:
24573808
8.

Sensitive targeted quantification of ERK phosphorylation dynamics and stoichiometry in human cells without affinity enrichment.

Shi T, Gao Y, Gaffrey MJ, Nicora CD, Fillmore TL, Chrisler WB, Gritsenko MA, Wu C, He J, Bloodsworth KJ, Zhao R, Camp DG 2nd, Liu T, Rodland KD, Smith RD, Wiley HS, Qian WJ.

Anal Chem. 2015 Jan 20;87(2):1103-10. doi: 10.1021/ac503797x. Epub 2014 Dec 31.

9.

Measurement of the innate immune response in the airway.

Brasier AR, Zhao Y.

Adv Exp Med Biol. 2014;795:233-54. doi: 10.1007/978-1-4614-8603-9_15. Review.

PMID:
24162913
10.

Selected reaction monitoring-based proteomics: workflows, potential, pitfalls and future directions.

Picotti P, Aebersold R.

Nat Methods. 2012 May 30;9(6):555-66. doi: 10.1038/nmeth.2015. Review.

PMID:
22669653
11.

High-sensitivity analysis of specific peptides in complex samples by selected MS/MS ion monitoring and linear ion trap mass spectrometry: application to biological studies.

Jorge I, Casas EM, Villar M, Ortega-Pérez I, López-Ferrer D, Martínez-Ruiz A, Carrera M, Marina A, Martínez P, Serrano H, Cañas B, Were F, Gallardo JM, Lamas S, Redondo JM, García-Dorado D, Vázquez J.

J Mass Spectrom. 2007 Nov;42(11):1391-403.

PMID:
17960563
12.

Absolute quantitation of protein posttranslational modification isoform.

Yang Z, Li N.

Methods Mol Biol. 2015;1306:105-19. doi: 10.1007/978-1-4939-2648-0_8.

PMID:
25930697
13.

Use of stable isotope dimethyl labeling coupled to selected reaction monitoring to enhance throughput by multiplexing relative quantitation of targeted proteins.

Aye TT, Low TY, Bjørlykke Y, Barsnes H, Heck AJ, Berven FS.

Anal Chem. 2012 Jun 5;84(11):4999-5006. doi: 10.1021/ac300596r. Epub 2012 May 15.

PMID:
22548487
14.

Targeted quantitation of acetylated lysine peptides by selected reaction monitoring mass spectrometry.

Rardin MJ, Held JM, Gibson BW.

Methods Mol Biol. 2013;1077:121-31. doi: 10.1007/978-1-62703-637-5_8.

15.
16.

Isotope dilution liquid chromatography-tandem mass spectrometry for quantitative amino acid analysis.

Bunk DM, Lowenthal MS.

Methods Mol Biol. 2012;828:29-38. doi: 10.1007/978-1-61779-445-2_3.

PMID:
22125133
17.

Comparison of liquid chromatography-tandem mass spectrometry-based targeted proteomics and conventional analytical methods for the determination of P-glycoprotein in human breast cancer cells.

Yang T, Xu F, Xu J, Fang D, Yu Y, Chen Y.

J Chromatogr B Analyt Technol Biomed Life Sci. 2013 Oct 1;936:18-24. doi: 10.1016/j.jchromb.2013.07.023. Epub 2013 Aug 3.

PMID:
23968647
18.

Software eyes for protein post-translational modifications.

Na S, Paek E.

Mass Spectrom Rev. 2015 Mar-Apr;34(2):133-47. doi: 10.1002/mas.21425. Epub 2014 Jun 2. Review.

PMID:
24889695
19.

Prediction of novel modifications by unrestrictive search of tandem mass spectra.

Na S, Paek E.

J Proteome Res. 2009 Oct;8(10):4418-27. doi: 10.1021/pr9001146.

PMID:
19658439
20.

Peptides quantification by liquid chromatography with matrix-assisted laser desorption/ionization and selected reaction monitoring detection.

Lesur A, Varesio E, Domon B, Hopfgartner G.

J Proteome Res. 2012 Oct 5;11(10):4972-82. doi: 10.1021/pr300514u. Epub 2012 Aug 31.

PMID:
22897511

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