Format
Sort by
Items per page

Send to

Choose Destination

Links from PubMed

Items: 1 to 20 of 63

1.

Quantitative genetic-interaction mapping in mammalian cells.

Roguev A, Talbot D, Negri GL, Shales M, Cagney G, Bandyopadhyay S, Panning B, Krogan NJ.

Nat Methods. 2013 May;10(5):432-7. doi: 10.1038/nmeth.2398. Epub 2013 Feb 13.

2.

Genetic interaction mapping in mammalian cells using CRISPR interference.

Du D, Roguev A, Gordon DE, Chen M, Chen SH, Shales M, Shen JP, Ideker T, Mali P, Qi LS, Krogan NJ.

Nat Methods. 2017 Jun;14(6):577-580. doi: 10.1038/nmeth.4286. Epub 2017 May 8.

3.

Integrated platform for genome-wide screening and construction of high-density genetic interaction maps in mammalian cells.

Kampmann M, Bassik MC, Weissman JS.

Proc Natl Acad Sci U S A. 2013 Jun 18;110(25):E2317-26. doi: 10.1073/pnas.1307002110. Epub 2013 Jun 5.

4.

Mapping the Genetic Landscape of Human Cells.

Horlbeck MA, Xu A, Wang M, Bennett NK, Park CY, Bogdanoff D, Adamson B, Chow ED, Kampmann M, Peterson TR, Nakamura K, Fischbach MA, Weissman JS, Gilbert LA.

Cell. 2018 Aug 9;174(4):953-967.e22. doi: 10.1016/j.cell.2018.06.010. Epub 2018 Jul 19.

5.

A systematic mammalian genetic interaction map reveals pathways underlying ricin susceptibility.

Bassik MC, Kampmann M, Lebbink RJ, Wang S, Hein MY, Poser I, Weibezahn J, Horlbeck MA, Chen S, Mann M, Hyman AA, Leproust EM, McManus MT, Weissman JS.

Cell. 2013 Feb 14;152(4):909-22. doi: 10.1016/j.cell.2013.01.030. Epub 2013 Feb 8.

6.

Conservation and rewiring of functional modules revealed by an epistasis map in fission yeast.

Roguev A, Bandyopadhyay S, Zofall M, Zhang K, Fischer T, Collins SR, Qu H, Shales M, Park HO, Hayles J, Hoe KL, Kim DU, Ideker T, Grewal SI, Weissman JS, Krogan NJ.

Science. 2008 Oct 17;322(5900):405-10. doi: 10.1126/science.1162609. Epub 2008 Sep 25.

7.

Functional proteomics establishes the interaction of SIRT7 with chromatin remodeling complexes and expands its role in regulation of RNA polymerase I transcription.

Tsai YC, Greco TM, Boonmee A, Miteva Y, Cristea IM.

Mol Cell Proteomics. 2012 May;11(5):60-76. doi: 10.1074/mcp.A111.015156.

8.
9.

Genetic interaction networks: better understand to better predict.

Boucher B, Jenna S.

Front Genet. 2013 Dec 17;4:290. doi: 10.3389/fgene.2013.00290. Review.

10.
11.

Exploitation of genetic interaction network topology for the prediction of epistatic behavior.

Alanis-Lobato G, Cannistraci CV, Ravasi T.

Genomics. 2013 Oct;102(4):202-8. doi: 10.1016/j.ygeno.2013.07.010. Epub 2013 Jul 25.

12.

Array-based synthetic genetic screens to map bacterial pathways and functional networks in Escherichia coli.

Babu M, Gagarinova A, Emili A.

Methods Mol Biol. 2011;781:99-126. doi: 10.1007/978-1-61779-276-2_7.

PMID:
21877280
13.

Quantitative genome-wide genetic interaction screens reveal global epistatic relationships of protein complexes in Escherichia coli.

Babu M, Arnold R, Bundalovic-Torma C, Gagarinova A, Wong KS, Kumar A, Stewart G, Samanfar B, Aoki H, Wagih O, Vlasblom J, Phanse S, Lad K, Yeou Hsiung Yu A, Graham C, Jin K, Brown E, Golshani A, Kim P, Moreno-Hagelsieb G, Greenblatt J, Houry WA, Parkinson J, Emili A.

PLoS Genet. 2014 Feb 20;10(2):e1004120. doi: 10.1371/journal.pgen.1004120. eCollection 2014 Feb.

14.

Mapping bacterial functional networks and pathways in Escherichia Coli using synthetic genetic arrays.

Gagarinova A, Babu M, Greenblatt J, Emili A.

J Vis Exp. 2012 Nov 12;(69). pii: 4056. doi: 10.3791/4056.

15.

Mapping of signaling networks through synthetic genetic interaction analysis by RNAi.

Horn T, Sandmann T, Fischer B, Axelsson E, Huber W, Boutros M.

Nat Methods. 2011 Apr;8(4):341-6. doi: 10.1038/nmeth.1581. Epub 2011 Mar 6.

PMID:
21378980
16.

Protein complexes are central in the yeast genetic landscape.

Michaut M, Baryshnikova A, Costanzo M, Myers CL, Andrews BJ, Boone C, Bader GD.

PLoS Comput Biol. 2011 Feb;7(2):e1001092. doi: 10.1371/journal.pcbi.1001092. Epub 2011 Feb 24.

17.

Practical Analysis of Genome Contact Interaction Experiments.

Carty MA, Elemento O.

Methods Mol Biol. 2016;1418:177-89. doi: 10.1007/978-1-4939-3578-9_9.

PMID:
27008015
18.

Functional dissection of protein complexes involved in yeast chromosome biology using a genetic interaction map.

Collins SR, Miller KM, Maas NL, Roguev A, Fillingham J, Chu CS, Schuldiner M, Gebbia M, Recht J, Shales M, Ding H, Xu H, Han J, Ingvarsdottir K, Cheng B, Andrews B, Boone C, Berger SL, Hieter P, Zhang Z, Brown GW, Ingles CJ, Emili A, Allis CD, Toczyski DP, Weissman JS, Greenblatt JF, Krogan NJ.

Nature. 2007 Apr 12;446(7137):806-10. Epub 2007 Feb 21.

PMID:
17314980
19.

An RNAi-Based Candidate Screen for Modifiers of the CHD1 Chromatin Remodeler and Assembly Factor in Drosophila melanogaster.

Kim S, Bugga L, Hong ES, Zabinsky R, Edwards RG, Deodhar PA, Armstrong JA.

G3 (Bethesda). 2015 Nov 23;6(2):245-54. doi: 10.1534/g3.115.021691.

20.

Large scale screening of genetic interaction with sgf73(+) in fission yeast.

Guo Y, Lei B, Deng X, Yu Y, Lv H.

Yi Chuan. 2014 Jul;36(7):723-31. doi: 10.3724/SP.J.1005.2014.0723.

PMID:
25076038

Supplemental Content

Support Center