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Items: 1 to 20 of 300

1.
2.

Rice transposable elements are characterized by various methylation environments in the genome.

Takata M, Kiyohara A, Takasu A, Kishima Y, Ohtsubo H, Sano Y.

BMC Genomics. 2007 Dec 20;8:469.

3.
4.

Comparative transcriptomics of three Poaceae species reveals patterns of gene expression evolution.

Davidson RM, Gowda M, Moghe G, Lin H, Vaillancourt B, Shiu SH, Jiang N, Robin Buell C.

Plant J. 2012 Aug;71(3):492-502. doi: 10.1111/j.1365-313X.2012.05005.x. Epub 2012 Jun 5.

5.

Identification, characterization and distribution of transposable elements in the flax (Linum usitatissimum L.) genome.

González LG, Deyholos MK.

BMC Genomics. 2012 Nov 21;13:644. doi: 10.1186/1471-2164-13-644.

6.

Three groups of transposable elements with contrasting copy number dynamics and host responses in the maize (Zea mays ssp. mays) genome.

Diez CM, Meca E, Tenaillon MI, Gaut BS.

PLoS Genet. 2014 Apr 17;10(4):e1004298. doi: 10.1371/journal.pgen.1004298. eCollection 2014 Apr.

7.
8.

A high-copy-number CACTA family transposon in temperate grasses and cereals.

Langdon T, Jenkins G, Hasterok R, Jones RN, King IP.

Genetics. 2003 Mar;163(3):1097-108.

9.

Genome-wide analysis of transposable elements in the coffee berry borer Hypothenemus hampei (Coleoptera: Curculionidae): description of novel families.

Hernandez-Hernandez EM, Fernández-Medina RD, Navarro-Escalante L, Nuñez J, Benavides-Machado P, Carareto CMA.

Mol Genet Genomics. 2017 Jun;292(3):565-583. doi: 10.1007/s00438-017-1291-7. Epub 2017 Feb 15.

PMID:
28204924
10.

Survey of transposable elements from rice genomic sequences.

Turcotte K, Srinivasan S, Bureau T.

Plant J. 2001 Jan;25(2):169-79.

11.

Abundance, distribution and potential impact of transposable elements in the genome of Mycosphaerella fijiensis.

Santana MF, Silva JC, Batista AD, Ribeiro LE, da Silva GF, de Araújo EF, de Queiroz MV.

BMC Genomics. 2012 Dec 22;13:720. doi: 10.1186/1471-2164-13-720.

12.

Transposable elements in phytopathogenic Verticillium spp.: insights into genome evolution and inter- and intra-specific diversification.

Amyotte SG, Tan X, Pennerman K, Jimenez-Gasco Mdel M, Klosterman SJ, Ma LJ, Dobinson KF, Veronese P.

BMC Genomics. 2012 Jul 16;13:314. doi: 10.1186/1471-2164-13-314.

13.

Identification of a high frequency transposon induced by tissue culture, nDaiZ, a member of the hAT family in rice.

Huang J, Zhang K, Shen Y, Huang Z, Li M, Tang D, Gu M, Cheng Z.

Genomics. 2009 Mar;93(3):274-81. doi: 10.1016/j.ygeno.2008.11.007. Epub 2008 Dec 23.

14.

CACTA transposons in Triticeae. A diverse family of high-copy repetitive elements.

Wicker T, Guyot R, Yahiaoui N, Keller B.

Plant Physiol. 2003 May;132(1):52-63.

15.

Transposable element annotation of the rice genome.

Juretic N, Bureau TE, Bruskiewich RM.

Bioinformatics. 2004 Jan 22;20(2):155-60.

PMID:
14734305
16.

A new method to compute K-mer frequencies and its application to annotate large repetitive plant genomes.

Kurtz S, Narechania A, Stein JC, Ware D.

BMC Genomics. 2008 Oct 31;9:517. doi: 10.1186/1471-2164-9-517.

17.

Dynamic nucleotide-binding site and leucine-rich repeat-encoding genes in the grass family.

Luo S, Zhang Y, Hu Q, Chen J, Li K, Lu C, Liu H, Wang W, Kuang H.

Plant Physiol. 2012 May;159(1):197-210. doi: 10.1104/pp.111.192062. Epub 2012 Mar 15.

18.

Comparative genomic paleontology across plant kingdom reveals the dynamics of TE-driven genome evolution.

El Baidouri M, Panaud O.

Genome Biol Evol. 2013;5(5):954-65. doi: 10.1093/gbe/evt025.

19.

Diversity and structure of PIF/Harbinger-like elements in the genome of Medicago truncatula.

Grzebelus D, Lasota S, Gambin T, Kucherov G, Gambin A.

BMC Genomics. 2007 Nov 9;8:409.

20.

Functional characterization of sugarcane mustang domesticated transposases and comparative diversity in sugarcane, rice, maize and sorghum.

Kajihara D, de Godoy F, Hamaji TA, Blanco SR, Van Sluys MA, Rossi M.

Genet Mol Biol. 2012 Jul;35(3):632-9. doi: 10.1590/S1415-47572012005000038. Epub 2012 Jul 5.

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