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Items: 1 to 20 of 91

1.

Use of the canonical discriminant analysis to select SNP markers for bovine breed assignment and traceability purposes.

Dimauro C, Cellesi M, Steri R, Gaspa G, Sorbolini S, Stella A, Macciotta NP.

Anim Genet. 2013 Aug;44(4):377-82. doi: 10.1111/age.12021. Epub 2013 Jan 24.

PMID:
23347105
2.

Use of canonical discriminant analysis to study signatures of selection in cattle.

Sorbolini S, Gaspa G, Steri R, Dimauro C, Cellesi M, Stella A, Marras G, Marsan PA, Valentini A, Macciotta NP.

Genet Sel Evol. 2016 Aug 12;48(1):58. doi: 10.1186/s12711-016-0236-7.

3.

Predicting breed composition using breed frequencies of 50,000 markers from the US Meat Animal Research Center 2,000 Bull Project.

Kuehn LA, Keele JW, Bennett GL, McDaneld TG, Smith TP, Snelling WM, Sonstegard TS, Thallman RM.

J Anim Sci. 2011 Jun;89(6):1742-50. doi: 10.2527/jas.2010-3530. Epub 2011 Jan 28.

4.

Combined use of principal component analysis and random forests identify population-informative single nucleotide polymorphisms: application in cattle breeds.

Bertolini F, Galimberti G, Calò DG, Schiavo G, Matassino D, Fontanesi L.

J Anim Breed Genet. 2015 Oct;132(5):346-56. doi: 10.1111/jbg.12155. Epub 2015 Mar 17.

PMID:
25781205
5.

An assessment of population structure in eight breeds of cattle using a whole genome SNP panel.

McKay SD, Schnabel RD, Murdoch BM, Matukumalli LK, Aerts J, Coppieters W, Crews D, Dias Neto E, Gill CA, Gao C, Mannen H, Wang Z, Van Tassell CP, Williams JL, Taylor JF, Moore SS.

BMC Genet. 2008 May 20;9:37. doi: 10.1186/1471-2156-9-37.

6.

Selection of SNP from 50K and 777K arrays to predict breed of origin in cattle.

Hulsegge B, Calus MP, Windig JJ, Hoving-Bolink AH, Maurice-van Eijndhoven MH, Hiemstra SJ.

J Anim Sci. 2013 Nov;91(11):5128-34. doi: 10.2527/jas.2013-6678. Epub 2013 Sep 17.

7.

Relationships between Podolic cattle breeds assessed by single nucleotide polymorphisms (SNPs) genotyping.

Pariset L, Mariotti M, Nardone A, Soysal MI, Ozkan E, Williams JL, Dunner S, Leveziel H, Maróti-Agóts A, Bodò I, Valentini A.

J Anim Breed Genet. 2010 Dec;127(6):481-8. doi: 10.1111/j.1439-0388.2010.00868.x. Epub 2010 Oct 28.

PMID:
21077972
8.

Improving accuracy of genomic predictions within and between dairy cattle breeds with imputed high-density single nucleotide polymorphism panels.

Erbe M, Hayes BJ, Matukumalli LK, Goswami S, Bowman PJ, Reich CM, Mason BA, Goddard ME.

J Dairy Sci. 2012 Jul;95(7):4114-29. doi: 10.3168/jds.2011-5019. Erratum in: J Dairy Sci. 2014 Oct;97(10):6622.

9.

Application of highly differentiated SNPs between Japanese Black and Holstein to a breed assignment test between Japanese Black and F(1) (Japanese Black x Holstein) and Holstein.

Nishimura S, Watanabe T, Ogino A, Shimizu K, Morita M, Sugimoto Y, Takasuga A.

Anim Sci J. 2013 Jan;84(1):1-7. doi: 10.1111/j.1740-0929.2012.01036.x. Epub 2012 Jun 27.

PMID:
23302075
10.

Multibreed genomic evaluations using purebred Holsteins, Jerseys, and Brown Swiss.

Olson KM, VanRaden PM, Tooker ME.

J Dairy Sci. 2012 Sep;95(9):5378-83. doi: 10.3168/jds.2011-5006.

PMID:
22916944
11.

Development of breed identification markers based on a bovine 50K SNP array.

Suekawa Y, Aihara H, Araki M, Hosokawa D, Mannen H, Sasazaki S.

Meat Sci. 2010 Jun;85(2):285-8. doi: 10.1016/j.meatsci.2010.01.015. Epub 2010 Jan 18.

PMID:
20374900
12.

Hot topic: performance of bovine high-density genotyping platforms in Holsteins and Jerseys.

Rincon G, Weber KL, Eenennaam AL, Golden BL, Medrano JF.

J Dairy Sci. 2011 Dec;94(12):6116-21. doi: 10.3168/jds.2011-4764.

PMID:
22118099
13.

Use of breed-specific single nucleotide polymorphisms to discriminate between Holstein and Jersey dairy cattle breeds.

Pant SD, Schenkel FS, Verschoor CP, Karrow NA.

Anim Biotechnol. 2012;23(1):1-10. doi: 10.1080/10495398.2012.636224.

PMID:
22292697
14.

Identification of high utility SNPs for population assignment and traceability purposes in the pig using high-throughput sequencing.

Ramos AM, Megens HJ, Crooijmans RP, Schook LB, Groenen MA.

Anim Genet. 2011 Dec;42(6):613-20. doi: 10.1111/j.1365-2052.2011.02198.x. Epub 2011 Apr 25.

PMID:
22035002
15.

Selection of single-nucleotide polymorphisms and quality of genotypes used in genomic evaluation of dairy cattle in the United States and Canada.

Wiggans GR, Sonstegard TS, VanRaden PM, Matukumalli LK, Schnabel RD, Taylor JF, Schenkel FS, Van Tassell CP.

J Dairy Sci. 2009 Jul;92(7):3431-6. doi: 10.3168/jds.2008-1758.

PMID:
19528621
16.

Prediction of genomic breeding values for dairy traits in Italian Brown and Simmental bulls using a principal component approach.

Pintus MA, Gaspa G, Nicolazzi EL, Vicario D, Rossoni A, Ajmone-Marsan P, Nardone A, Dimauro C, Macciotta NP.

J Dairy Sci. 2012 Jun;95(6):3390-400. doi: 10.3168/jds.2011-4274.

PMID:
22612973
17.

High-resolution haplotype block structure in the cattle genome.

Villa-Angulo R, Matukumalli LK, Gill CA, Choi J, Van Tassell CP, Grefenstette JJ.

BMC Genet. 2009 Apr 24;10:19. doi: 10.1186/1471-2156-10-19.

18.

Accuracy of genotype imputation in sheep breeds.

Hayes BJ, Bowman PJ, Daetwyler HD, Kijas JW, van der Werf JH.

Anim Genet. 2012 Feb;43(1):72-80. doi: 10.1111/j.1365-2052.2011.02208.x. Epub 2011 May 27.

PMID:
22221027
19.

Pedigree- and marker-based methods in the estimation of genetic diversity in small groups of Holstein cattle.

Engelsma KA, Veerkamp RF, Calus MP, Bijma P, Windig JJ.

J Anim Breed Genet. 2012 Jun;129(3):195-205. doi: 10.1111/j.1439-0388.2012.00987.x. Epub 2012 Jan 27.

PMID:
22583324
20.

Use of bovine single nucleotide polymorphism markers to verify sample tracking in beef processing.

Heaton MP, Keen JE, Clawson ML, Harhay GP, Bauer N, Shultz C, Green BT, Durso L, Chitko-McKown CG, Laegreid WW.

J Am Vet Med Assoc. 2005 Apr 15;226(8):1311-4.

PMID:
15844419

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