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Items: 1 to 20 of 104


An initial assessment of linkage disequilibrium (LD) in coffee trees: LD patterns in groups of Coffea canephora Pierre using microsatellite analysis.

Cubry P, de Bellis F, Avia K, Bouchet S, Pot D, Dufour M, Legnate H, Leroy T.

BMC Genomics. 2013 Jan 16;14:10. doi: 10.1186/1471-2164-14-10.


Development of new genomic microsatellite markers from robusta coffee (Coffea canephora Pierre ex A. Froehner) showing broad cross-species transferability and utility in genetic studies.

Hendre PS, Phanindranath R, Annapurna V, Lalremruata A, Aggarwal RK.

BMC Plant Biol. 2008 Apr 30;8:51. doi: 10.1186/1471-2229-8-51.


Genetic differentiation of wild and cultivated populations: diversity of Coffea canephora Pierre in Uganda.

Musoli P, Cubry P, Aluka P, Billot C, Dufour M, De Bellis F, Pot D, Bieysse D, Charrier A, Leroy T.

Genome. 2009 Jul;52(7):634-46. doi: 10.1139/G09-037.


An EST-based analysis identifies new genes and reveals distinctive gene expression features of Coffea arabica and Coffea canephora.

Mondego JM, Vidal RO, Carazzolle MF, Tokuda EK, Parizzi LP, Costa GG, Pereira LF, Andrade AC, Colombo CA, Vieira LG, Pereira GA; Brazilian Coffee Genome Project Consortium..

BMC Plant Biol. 2011 Feb 8;11:30. doi: 10.1186/1471-2229-11-30.


Diversity in coffee assessed with SSR markers: structure of the genus Coffea and perspectives for breeding.

Cubry P, Musoli P, Legnaté H, Pot D, de Bellis F, Poncet V, Anthony F, Dufour M, Leroy T.

Genome. 2008 Jan;51(1):50-63. doi: 10.1139/g07-096.


Development of genomic microsatellite markers in Coffea canephora and their transferability to other coffee species.

Poncet V, Dufour M, Hamon P, Hamon S, de Kochko A, Leroy T.

Genome. 2007 Dec;50(12):1156-61.


Developing core collections to optimize the management and the exploitation of diversity of the coffee Coffea canephora.

Leroy T, De Bellis F, Legnate H, Musoli P, Kalonji A, Loor Solórzano RG, Cubry P.

Genetica. 2014 Jun;142(3):185-99. doi: 10.1007/s10709-014-9766-5. Epub 2014 May 4.


RBCS1 expression in coffee: Coffea orthologs, Coffea arabica homeologs, and expression variability between genotypes and under drought stress.

Marraccini P, Freire LP, Alves GS, Vieira NG, Vinecky F, Elbelt S, Ramos HJ, Montagnon C, Vieira LG, Leroy T, Pot D, Silva VA, Rodrigues GC, Andrade AC.

BMC Plant Biol. 2011 May 16;11:85. doi: 10.1186/1471-2229-11-85.


SSR mining in coffee tree EST databases: potential use of EST-SSRs as markers for the Coffea genus.

Poncet V, Rondeau M, Tranchant C, Cayrel A, Hamon S, de Kochko A, Hamon P.

Mol Genet Genomics. 2006 Nov;276(5):436-49. Epub 2006 Aug 19.


AFLP and SSR polymorphism in a Coffea interspecific backcross progeny [( C. heterocalyx x C. canephora) x C. canephora].

Coulibaly I, Revol B, Noirot M, Poncet V, Lorieux M, Carasco-Lacombe C, Minier J, Dufour M, Hamon P.

Theor Appl Genet. 2003 Oct;107(6):1148-55. Epub 2003 Jul 23.


Somatic embryogenesis and vegetative cutting capacity are under distinct genetic control in Coffea canephora Pierre.

Priyono, Florin B, Rigoreau M, Ducos JP, Sumirat U, Mawardi S, Lambot C, Broun P, Pétiard V, Wahyudi T, Crouzillat D.

Plant Cell Rep. 2010 Apr;29(4):343-57. doi: 10.1007/s00299-010-0825-9. Epub 2010 Feb 10.


Gene introgression into Coffea arabica by way of triploid hybrids (C. arabica x C. canephora).

Herrera JC, Combes MC, Cortina H, Alvarado G, Lashermes P.

Heredity (Edinb). 2002 Dec;89(6):488-94.


Micro-collinearity and genome evolution in the vicinity of an ethylene receptor gene of cultivated diploid and allotetraploid coffee species (Coffea).

Yu Q, Guyot R, de Kochko A, Byers A, Navajas-Pérez R, Langston BJ, Dubreuil-Tranchant C, Paterson AH, Poncet V, Nagai C, Ming R.

Plant J. 2011 Jul;67(2):305-17. doi: 10.1111/j.1365-313X.2011.04590.x. Epub 2011 May 12.


Genetic diversity of arabica coffee (Coffea arabica L.) in Nicaragua as estimated by simple sequence repeat markers.

Geleta M, Herrera I, Monzón A, Bryngelsson T.

ScientificWorldJournal. 2012;2012:939820. doi: 10.1100/2012/939820. Epub 2012 Jun 4.


Genetic characterization of an elite coffee germplasm assessed by gSSR and EST-SSR markers.

Missio RF, Caixeta ET, Zambolim EM, Pena GF, Zambolim L, Dias LA, Sakiyama NS.

Genet Mol Res. 2011 Oct 6;10(4):2366-81. doi: 10.4238/2011.October.6.2.


Genetic structure and diversity of coffee (Coffea) across Africa and the Indian Ocean islands revealed using microsatellites.

Razafinarivo NJ, Guyot R, Davis AP, Couturon E, Hamon S, Crouzillat D, Rigoreau M, Dubreuil-Tranchant C, Poncet V, De Kochko A, Rakotomalala JJ, Hamon P.

Ann Bot. 2013 Feb;111(2):229-48. doi: 10.1093/aob/mcs283. Epub 2012 Dec 28.


Organization and molecular evolution of a disease-resistance gene cluster in coffee trees.

Ribas AF, Cenci A, Combes MC, Etienne H, Lashermes P.

BMC Genomics. 2011 May 16;12:240. doi: 10.1186/1471-2164-12-240.


Characterization, high-resolution mapping and differential expression of three homologous PAL genes in Coffea canephora Pierre (Rubiaceae).

Lepelley M, Mahesh V, McCarthy J, Rigoreau M, Crouzillat D, Chabrillange N, de Kochko A, Campa C.

Planta. 2012 Jul;236(1):313-26. doi: 10.1007/s00425-012-1613-2. Epub 2012 Feb 21.

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