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Items: 1 to 20 of 182

1.

Quantitative measurements of N-linked glycoproteins in human plasma by SWATH-MS.

Liu Y, Hüttenhain R, Surinova S, Gillet LC, Mouritsen J, Brunner R, Navarro P, Aebersold R.

Proteomics. 2013 Apr;13(8):1247-56. doi: 10.1002/pmic.201200417. Epub 2013 Mar 11.

PMID:
23322582
2.

High sensitivity detection of plasma proteins by multiple reaction monitoring of N-glycosites.

Stahl-Zeng J, Lange V, Ossola R, Eckhardt K, Krek W, Aebersold R, Domon B.

Mol Cell Proteomics. 2007 Oct;6(10):1809-17. Epub 2007 Jul 20.

3.

Reproducible and consistent quantification of the Saccharomyces cerevisiae proteome by SWATH-mass spectrometry.

Selevsek N, Chang CY, Gillet LC, Navarro P, Bernhardt OM, Reiter L, Cheng LY, Vitek O, Aebersold R.

Mol Cell Proteomics. 2015 Mar;14(3):739-49. doi: 10.1074/mcp.M113.035550. Epub 2015 Jan 5.

4.

Targeted mass spectrometric approach for biomarker discovery and validation with nonglycosylated tryptic peptides from N-linked glycoproteins in human plasma.

Lee JY, Kim JY, Park GW, Cheon MH, Kwon KH, Ahn YH, Moon MH, Lee HJ, Paik YK, Yoo JS.

Mol Cell Proteomics. 2011 Dec;10(12):M111.009290. doi: 10.1074/mcp.M111.009290. Epub 2011 Sep 22.

5.

Mass spectrometric discovery and selective reaction monitoring (SRM) of putative protein biomarker candidates in first trimester Trisomy 21 maternal serum.

Lopez MF, Kuppusamy R, Sarracino DA, Prakash A, Athanas M, Krastins B, Rezai T, Sutton JN, Peterman S, Nicolaides K.

J Proteome Res. 2011 Jan 7;10(1):133-42. doi: 10.1021/pr100153j. Epub 2010 Jun 4.

PMID:
20499897
6.

The reproducible acquisition of comparative liquid chromatography/tandem mass spectrometry data from complex biological samples.

Stewart II, Zhao L, Le Bihan T, Larsen B, Scozzaro S, Figeys D, Mao GD, Ornatsky O, Dharsee M, Orsi C, Ewing R, Goh T.

Rapid Commun Mass Spectrom. 2004;18(15):1697-710.

PMID:
15282768
7.

Mass spectrometric protein maps for biomarker discovery and clinical research.

Liu Y, Hüttenhain R, Collins B, Aebersold R.

Expert Rev Mol Diagn. 2013 Nov;13(8):811-25. doi: 10.1586/14737159.2013.845089. Epub 2013 Oct 21. Review.

8.

Biomarker validation in blood specimens by selected reaction monitoring mass spectrometry of N-glycosites.

Ossola R, Schiess R, Picotti P, Rinner O, Reiter L, Aebersold R.

Methods Mol Biol. 2011;728:179-94. doi: 10.1007/978-1-61779-068-3_11.

PMID:
21468948
9.

Minimal sample requirement for highly multiplexed protein quantification in cell lines and tissues by PCT-SWATH mass spectrometry.

Shao S, Guo T, Koh CC, Gillessen S, Joerger M, Jochum W, Aebersold R.

Proteomics. 2015 Nov;15(21):3711-21. doi: 10.1002/pmic.201500161. Epub 2015 Sep 10.

PMID:
26287124
10.

MS1 Peptide Ion Intensity Chromatograms in MS2 (SWATH) Data Independent Acquisitions. Improving Post Acquisition Analysis of Proteomic Experiments.

Rardin MJ, Schilling B, Cheng LY, MacLean BX, Sorensen DJ, Sahu AK, MacCoss MJ, Vitek O, Gibson BW.

Mol Cell Proteomics. 2015 Sep;14(9):2405-19. doi: 10.1074/mcp.O115.048181. Epub 2015 May 17.

11.

Highly multiplexed targeted proteomics using precise control of peptide retention time.

Gallien S, Peterman S, Kiyonami R, Souady J, Duriez E, Schoen A, Domon B.

Proteomics. 2012 Apr;12(8):1122-33. doi: 10.1002/pmic.201100533.

PMID:
22577013
13.
14.

Identification of a Set of Conserved Eukaryotic Internal Retention Time Standards for Data-independent Acquisition Mass Spectrometry.

Parker SJ, Rost H, Rosenberger G, Collins BC, Malmström L, Amodei D, Venkatraman V, Raedschelders K, Van Eyk JE, Aebersold R.

Mol Cell Proteomics. 2015 Oct;14(10):2800-13. doi: 10.1074/mcp.O114.042267. Epub 2015 Jul 21.

15.

High-throughput SISCAPA quantitation of peptides from human plasma digests by ultrafast, liquid chromatography-free mass spectrometry.

Razavi M, Frick LE, LaMarr WA, Pope ME, Miller CA, Anderson NL, Pearson TW.

J Proteome Res. 2012 Dec 7;11(12):5642-9. doi: 10.1021/pr300652v. Epub 2012 Nov 19.

PMID:
23126378
16.

Detection and quantification of plasma amyloid-β by selected reaction monitoring mass spectrometry.

Kim JS, Ahn HS, Cho SM, Lee JE, Kim Y, Lee C.

Anal Chim Acta. 2014 Aug 20;840:1-9. doi: 10.1016/j.aca.2014.06.024. Epub 2014 Jun 17.

PMID:
25086887
17.

Sequential Window Acquisition of all Theoretical Mass Spectra (SWATH) Analysis for Characterization and Quantification of Histone Post-translational Modifications.

Sidoli S, Lin S, Xiong L, Bhanu NV, Karch KR, Johansen E, Hunter C, Mollah S, Garcia BA.

Mol Cell Proteomics. 2015 Sep;14(9):2420-8. doi: 10.1074/mcp.O114.046102. Epub 2015 Jan 30.

18.

The detection, correlation, and comparison of peptide precursor and product ions from data independent LC-MS with data dependant LC-MS/MS.

Geromanos SJ, Vissers JP, Silva JC, Dorschel CA, Li GZ, Gorenstein MV, Bateman RH, Langridge JI.

Proteomics. 2009 Mar;9(6):1683-95. doi: 10.1002/pmic.200800562.

PMID:
19294628
19.

Precision of heavy-light peptide ratios measured by maldi-tof mass spectrometry.

Anderson NL, Razavi M, Pearson TW, Kruppa G, Paape R, Suckau D.

J Proteome Res. 2012 Mar 2;11(3):1868-78. doi: 10.1021/pr201092v. Epub 2012 Feb 3.

PMID:
22257466
20.

Multiple products monitoring as a robust approach for peptide quantification.

Baek JH, Kim H, Shin B, Yu MH.

J Proteome Res. 2009 Jul;8(7):3625-32. doi: 10.1021/pr800853k.

PMID:
19505066

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