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Small-angle X-ray scattering and in silico modeling approaches for the accurate functional annotation of an LysR-type transcriptional regulator.

Toledo MA, Santos CA, Mendes JS, Pelloso AC, Beloti LL, Crucello A, Favaro MT, Santiago AS, Schneider DR, Saraiva AM, Stach-Machado DR, Souza AA, Trivella DB, Aparicio R, Tasic L, Azzoni AR, Souza AP.

Biochim Biophys Acta. 2013 Mar;1834(3):697-707. doi: 10.1016/j.bbapap.2012.12.017. Epub 2013 Jan 5.


Functional and structural studies of the disulfide isomerase DsbC from the plant pathogen Xylella fastidiosa reveals a redox-dependent oligomeric modulation in vitro.

Santos CA, Toledo MA, Trivella DB, Beloti LL, Schneider DR, Saraiva AM, Crucello A, Azzoni AR, Souza AA, Aparicio R, Souza AP.

FEBS J. 2012 Oct;279(20):3828-43. doi: 10.1111/j.1742-4658.2012.08743.x. Epub 2012 Sep 7.


Distinct effector-binding sites enable synergistic transcriptional activation by BenM, a LysR-type regulator.

Ezezika OC, Haddad S, Clark TJ, Neidle EL, Momany C.

J Mol Biol. 2007 Mar 30;367(3):616-29. Epub 2006 Oct 4.


Characterization of the LysR-type transcriptional regulator YcjZ-like from Xylella fastidiosa overexpressed in Escherichia coli.

Santiago AS, Santos CA, Mendes JS, Toledo MA, Beloti LL, Souza AA, Souza AP.

Protein Expr Purif. 2015 Sep;113:72-8. doi: 10.1016/j.pep.2015.05.003. Epub 2015 May 12.


Full-length structures of BenM and two variants reveal different oligomerization schemes for LysR-type transcriptional regulators.

Ruangprasert A, Craven SH, Neidle EL, Momany C.

J Mol Biol. 2010 Dec 10;404(4):568-86. doi: 10.1016/j.jmb.2010.09.053. Epub 2010 Oct 7.


Characterization of the TolB-Pal trans-envelope complex from Xylella fastidiosa reveals a dynamic and coordinated protein expression profile during the biofilm development process.

Santos CA, Janissen R, Toledo MA, Beloti LL, Azzoni AR, Cotta MA, Souza AP.

Biochim Biophys Acta. 2015 Oct;1854(10 Pt A):1372-81. doi: 10.1016/j.bbapap.2015.05.018. Epub 2015 Jun 4.


Crystallization of the effector-binding domains of BenM and CatM, LysR-type transcriptional regulators from Acinetobacter sp. ADP1.

Clark T, Haddad S, Neidle E, Momany C.

Acta Crystallogr D Biol Crystallogr. 2004 Jan;60(Pt 1):105-8. Epub 2003 Dec 18.


Inducer responses of BenM, a LysR-type transcriptional regulator from Acinetobacter baylyi ADP1.

Craven SH, Ezezika OC, Haddad S, Hall RA, Momany C, Neidle EL.

Mol Microbiol. 2009 May;72(4):881-94. doi: 10.1111/j.1365-2958.2009.06686.x. Epub 2009 Apr 8.


Global gene expression under nitrogen starvation in Xylella fastidiosa: contribution of the σ54 regulon.

da Silva Neto JF, Koide T, Gomes SL, Marques MV.

BMC Microbiol. 2010 Aug 28;10:231. doi: 10.1186/1471-2180-10-231.


Functional and small-angle X-ray scattering studies of a new stationary phase survival protein E (SurE) from Xylella fastidiosa--evidence of allosteric behaviour.

Saraiva AM, Reis MA, Tada SF, Rosselli-Murai LK, Schneider DR, Pelloso AC, Toledo MA, Giles C, Aparicio R, de Souza AP.

FEBS J. 2009 Nov;276(22):6751-62. doi: 10.1111/j.1742-4658.2009.07390.x. Epub 2009 Oct 16.


Characterization of an oxidative stress response regulator, homologous to Escherichia coli OxyR, from the phytopathogen Xylella fastidiosa.

Toledo MA, Schneider DR, Azzoni AR, Favaro MT, Pelloso AC, Santos CA, Saraiva AM, Souza AP.

Protein Expr Purif. 2011 Feb;75(2):204-10. doi: 10.1016/j.pep.2010.10.004. Epub 2010 Oct 14.


A novel protein refolding protocol for the solubilization and purification of recombinant peptidoglycan-associated lipoprotein from Xylella fastidiosa overexpressed in Escherichia coli.

Santos CA, Beloti LL, Toledo MA, Crucello A, Favaro MT, Mendes JS, Santiago AS, Azzoni AR, Souza AP.

Protein Expr Purif. 2012 Apr;82(2):284-9. doi: 10.1016/j.pep.2012.01.010. Epub 2012 Jan 28.


Gene expression profile of the plant pathogen Xylella fastidiosa during biofilm formation in vitro.

de Souza AA, Takita MA, Coletta-Filho HD, Caldana C, Yanai GM, Muto NH, de Oliveira RC, Nunes LR, Machado MA.

FEMS Microbiol Lett. 2004 Aug 15;237(2):341-53.


Influence of xylem fluid chemistry on planktonic growth, biofilm formation and aggregation of Xylella fastidiosa.

Andersen PC, Brodbeck BV, Oden S, Shriner A, Leite B.

FEMS Microbiol Lett. 2007 Sep;274(2):210-7. Epub 2007 Jul 4.


A new member of the aldo-keto reductase family from the plant pathogen Xylella fastidiosa.

Rosselli LK, Oliveira CL, Azzoni AR, Tada SF, Catani CF, Saraiva AM, Soares JS, Medrano FJ, Torriani IL, Souza AP.

Arch Biochem Biophys. 2006 Sep 15;453(2):143-50. Epub 2006 Jul 31.


Genes involved in the benzoate catabolic pathway in Acinetobacter calcoaceticus PHEA-2.

Zhan Y, Yu H, Yan Y, Chen M, Lu W, Li S, Peng Z, Zhang W, Ping S, Wang J, Lin M.

Curr Microbiol. 2008 Dec;57(6):609-14. doi: 10.1007/s00284-008-9251-4. Epub 2008 Sep 10.


CatM regulation of the benABCDE operon: functional divergence of two LysR-type paralogs in Acinetobacter baylyi ADP1.

Ezezika OC, Collier-Hyams LS, Dale HA, Burk AC, Neidle EL.

Appl Environ Microbiol. 2006 Mar;72(3):1749-58.

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