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Items: 1 to 20 of 163

1.

Development and evaluation of a genome-wide 6K SNP array for diploid sweet cherry and tetraploid sour cherry.

Peace C, Bassil N, Main D, Ficklin S, Rosyara UR, Stegmeir T, Sebolt A, Gilmore B, Lawley C, Mockler TC, Bryant DW, Wilhelm L, Iezzoni A.

PLoS One. 2012;7(12):e48305. doi: 10.1371/journal.pone.0048305. Epub 2012 Dec 20.

2.

Development and evaluation of a 9K SNP array for peach by internationally coordinated SNP detection and validation in breeding germplasm.

Verde I, Bassil N, Scalabrin S, Gilmore B, Lawley CT, Gasic K, Micheletti D, Rosyara UR, Cattonaro F, Vendramin E, Main D, Aramini V, Blas AL, Mockler TC, Bryant DW, Wilhelm L, Troggio M, Sosinski B, Aranzana MJ, Arús P, Iezzoni A, Morgante M, Peace C.

PLoS One. 2012;7(4):e35668. doi: 10.1371/journal.pone.0035668. Epub 2012 Apr 20. Erratum in: PLoS One. 2012;7(6). doi:10.1371/annotation/33f1ba92-c304-4757-91aa-555de64a0768.

3.

Genome-wide SNP detection, validation, and development of an 8K SNP array for apple.

Chagné D, Crowhurst RN, Troggio M, Davey MW, Gilmore B, Lawley C, Vanderzande S, Hellens RP, Kumar S, Cestaro A, Velasco R, Main D, Rees JD, Iezzoni A, Mockler T, Wilhelm L, Van de Weg E, Gardiner SE, Bassil N, Peace C.

PLoS One. 2012;7(2):e31745. doi: 10.1371/journal.pone.0031745. Epub 2012 Feb 21.

4.

High-throughput genomics in sorghum: from whole-genome resequencing to a SNP screening array.

Bekele WA, Wieckhorst S, Friedt W, Snowdon RJ.

Plant Biotechnol J. 2013 Dec;11(9):1112-25. doi: 10.1111/pbi.12106. Epub 2013 Aug 7.

5.

Rapid gene-based SNP and haplotype marker development in non-model eukaryotes using 3'UTR sequencing.

Koepke T, Schaeffer S, Krishnan V, Jiwan D, Harper A, Whiting M, Oraguzie N, Dhingra A.

BMC Genomics. 2012 Jan 12;13:18. doi: 10.1186/1471-2164-13-18.

6.

Construction of High Density Sweet Cherry (Prunus avium L.) Linkage Maps Using Microsatellite Markers and SNPs Detected by Genotyping-by-Sequencing (GBS).

Guajardo V, Solís S, Sagredo B, Gainza F, Muñoz C, Gasic K, Hinrichsen P.

PLoS One. 2015 May 26;10(5):e0127750. doi: 10.1371/journal.pone.0127750. eCollection 2015.

7.

Genetic relationships between diploid and allotetraploid cherry species (Prunus avium, Prunus x gondouinii and Prunus cerasus).

Tavaud M, Zanetto A, David JL, Laigret F, Dirlewanger E.

Heredity (Edinb). 2004 Dec;93(6):631-8.

8.

Identification of incompatibility alleles in the tetraploid species sour cherry.

Tobutt KR, Bosković R, Cerović R, Sonneveld T, Ruzić D.

Theor Appl Genet. 2004 Mar;108(5):775-85. Epub 2003 Dec 19.

PMID:
14689184
9.

Development and preliminary evaluation of a 90 K Axiom® SNP array for the allo-octoploid cultivated strawberry Fragaria × ananassa.

Bassil NV, Davis TM, Zhang H, Ficklin S, Mittmann M, Webster T, Mahoney L, Wood D, Alperin ES, Rosyara UR, Koehorst-Vanc Putten H, Monfort A, Sargent DJ, Amaya I, Denoyes B, Bianco L, van Dijk T, Pirani A, Iezzoni A, Main D, Peace C, Yang Y, Whitaker V, Verma S, Bellon L, Brew F, Herrera R, van de Weg E.

BMC Genomics. 2015 Mar 7;16:155. doi: 10.1186/s12864-015-1310-1.

10.

Chloroplast inheritance and DNA variation in sweet, sour, and ground cherry.

Brettin TS, Karle R, Crowe EL, Iezzoni AF.

J Hered. 2000 Jan-Feb;91(1):75-9.

PMID:
10739133
11.

Development and cross-species/genera transferability of microsatellite markers discovered using 454 genome sequencing in chokecherry (Prunus virginiana L.).

Wang H, Walla JA, Zhong S, Huang D, Dai W.

Plant Cell Rep. 2012 Nov;31(11):2047-55. doi: 10.1007/s00299-012-1315-z. Epub 2012 Jul 27.

PMID:
22837059
13.

Molecular characterization of three non-functional S-haplotypes in sour cherry (Prunus cerasus).

Tsukamoto T, Hauck NR, Tao R, Jiang N, Iezzoni AF.

Plant Mol Biol. 2006 Oct;62(3):371-83. Epub 2006 Aug 17.

PMID:
16915517
14.

Genetic and molecular characterization of three novel S-haplotypes in sour cherry (Prunus cerasus L.).

Tsukamoto T, Potter D, Tao R, Vieira CP, Vieira J, Iezzoni AF.

J Exp Bot. 2008;59(11):3169-85. doi: 10.1093/jxb/ern172. Epub 2008 Jul 9.

15.

Evaluation of multiple approaches to identify genome-wide polymorphisms in closely related genotypes of sweet cherry (Prunus avium L.).

Hewitt S, Kilian B, Hari R, Koepke T, Sharpe R, Dhingra A.

Comput Struct Biotechnol J. 2017 Mar 18;15:290-298. doi: 10.1016/j.csbj.2017.03.002. eCollection 2017.

16.

Breeding in peach, cherry and plum: from a tissue culture, genetic, transcriptomic and genomic perspective.

Carrasco B, Meisel L, Gebauer M, Garcia-Gonzales R, Silva H.

Biol Res. 2013;46(3):219-30. doi: 10.4067/S0716-97602013000300001. Review.

17.

The genome sequence of sweet cherry (Prunus avium) for use in genomics-assisted breeding.

Shirasawa K, Isuzugawa K, Ikenaga M, Saito Y, Yamamoto T, Hirakawa H, Isobe S.

DNA Res. 2017 May 25. doi: 10.1093/dnares/dsx020. [Epub ahead of print]

PMID:
28541388
18.

Sequence-based ultra-dense genetic and physical maps reveal structural variations of allopolyploid cotton genomes.

Wang S, Chen J, Zhang W, Hu Y, Chang L, Fang L, Wang Q, Lv F, Wu H, Si Z, Chen S, Cai C, Zhu X, Zhou B, Guo W, Zhang T.

Genome Biol. 2015 May 24;16:108. doi: 10.1186/s13059-015-0678-1.

19.

Isozyme diversity in sour, sweet, and ground cherry.

Beaver JA, Iezzoni AF, Ramm CW.

Theor Appl Genet. 1995 May;90(6):847-52. doi: 10.1007/BF00222021.

PMID:
24172928
20.

Development and validation of a 20K single nucleotide polymorphism (SNP) whole genome genotyping array for apple (Malus × domestica Borkh).

Bianco L, Cestaro A, Sargent DJ, Banchi E, Derdak S, Di Guardo M, Salvi S, Jansen J, Viola R, Gut I, Laurens F, Chagné D, Velasco R, van de Weg E, Troggio M.

PLoS One. 2014 Oct 10;9(10):e110377. doi: 10.1371/journal.pone.0110377. eCollection 2014.

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