Similar articles for PMID: 23281872

Year	Number of Results
1999	1
2002	1
2003	1
2004	2
2005	1
2006	3
2007	5
2008	6
2009	6
2010	6
2011	9
2012	10
2013	5
2014	4
2015	10
2016	8
2017	6
2018	5
2019	3
2020	6
2021	3
2022	2
2023	3
2024	2

1

A flexible ancestral genome reconstruction method based on gapped adjacencies.

Gagnon Y, Blanchette M, El-Mabrouk N. Gagnon Y, et al. BMC Bioinformatics. 2012;13 Suppl 19(Suppl 19):S4. doi: 10.1186/1471-2105-13-S19-S4. Epub 2012 Dec 19. BMC Bioinformatics. 2012. PMID: 23281872 Free PMC article.

2

Ancestral gene synteny reconstruction improves extant species scaffolding.

Anselmetti Y, Berry V, Chauve C, Chateau A, Tannier E, Bérard S. Anselmetti Y, et al. BMC Genomics. 2015;16 Suppl 10(Suppl 10):S11. doi: 10.1186/1471-2164-16-S10-S11. Epub 2015 Oct 2. BMC Genomics. 2015. PMID: 26450761 Free PMC article.

3

Fast ancestral gene order reconstruction of genomes with unequal gene content.

Feijão P, Araujo E. Feijão P, et al. BMC Bioinformatics. 2016 Nov 11;17(Suppl 14):413. doi: 10.1186/s12859-016-1261-9. BMC Bioinformatics. 2016. PMID: 28185578 Free PMC article.

4

The SCJ Small Parsimony Problem for Weighted Gene Adjacencies.

Luhmann N, Lafond M, Thevenin A, Ouangraoua A, Wittler R, Chauve C. Luhmann N, et al. IEEE/ACM Trans Comput Biol Bioinform. 2019 Jul-Aug;16(4):1364-1373. doi: 10.1109/TCBB.2017.2661761. Epub 2017 Jan 31. IEEE/ACM Trans Comput Biol Bioinform. 2019. PMID: 28166504

5

Phylogenetic Reconstruction Based on Synteny Block and Gene Adjacencies.

Drillon G, Champeimont R, Oteri F, Fischer G, Carbone A. Drillon G, et al. Mol Biol Evol. 2020 Sep 1;37(9):2747-2762. doi: 10.1093/molbev/msaa114. Mol Biol Evol. 2020. PMID: 32384156 Free PMC article.

6

Ancestral Flowering Plant Chromosomes and Gene Orders Based on Generalized Adjacencies and Chromosomal Gene Co-Occurrences.

Xu Q, Jin L, Zhang Y, Zhang X, Zheng C, Leebens-Mack JH, Sankoff D. Xu Q, et al. J Comput Biol. 2021 Nov;28(11):1156-1179. doi: 10.1089/cmb.2021.0340. J Comput Biol. 2021. PMID: 34783601

7

ProCARs: Progressive Reconstruction of Ancestral Gene Orders.

Perrin A, Varré JS, Blanquart S, Ouangraoua A. Perrin A, et al. BMC Genomics. 2015;16 Suppl 5(Suppl 5):S6. doi: 10.1186/1471-2164-16-S5-S6. Epub 2015 May 26. BMC Genomics. 2015. PMID: 26040958 Free PMC article.

8

Evolution of gene neighborhoods within reconciled phylogenies.

Bérard S, Gallien C, Boussau B, Szöllősi GJ, Daubin V, Tannier E. Bérard S, et al. Bioinformatics. 2012 Sep 15;28(18):i382-i388. doi: 10.1093/bioinformatics/bts374. Bioinformatics. 2012. PMID: 22962456 Free PMC article.

9

Reconstructing ancestral gene orders with duplications guided by synteny level genome reconstruction.

Rajaraman A, Ma J. Rajaraman A, et al. BMC Bioinformatics. 2016 Nov 11;17(Suppl 14):414. doi: 10.1186/s12859-016-1262-8. BMC Bioinformatics. 2016. PMID: 28185565 Free PMC article.

10

Assembling contigs in draft genomes using reversals and block-interchanges.

Li CL, Chen KT, Lu CL. Li CL, et al. BMC Bioinformatics. 2013;14 Suppl 5(Suppl 5):S9. doi: 10.1186/1471-2105-14-S5-S9. Epub 2013 Apr 10. BMC Bioinformatics. 2013. PMID: 23734866 Free PMC article.

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