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Items: 1 to 20 of 85

1.

Microsatellite repeat dynamics in mitochondrial genomes of phytopathogenic fungi: frequency and distribution in the genic and intergenic regions.

Mahfooz S, Singh P, Maurya DK, Yadav MC, Tahoor A, Sahay H, Srivastava A, Prakash A.

Bioinformation. 2012;8(23):1171-5. doi: 10.6026/97320630081171. Epub 2012 Nov 23.

2.

Simple sequence repeats in organellar genomes of rice: frequency and distribution in genic and intergenic regions.

Rajendrakumar P, Biswal AK, Balachandran SM, Srinivasarao K, Sundaram RM.

Bioinformatics. 2007 Jan 1;23(1):1-4. Epub 2006 Oct 31.

PMID:
17077096
3.

Survey of simple sequence repeats in completed fungal genomes.

Karaoglu H, Lee CM, Meyer W.

Mol Biol Evol. 2005 Mar;22(3):639-49. Epub 2004 Nov 24. Erratum in: Mol Biol Evol. 2005 Apr;22(4):1159.

PMID:
15563717
4.

In silico analysis of SSRs in mitochondrial genomes of plants.

Kuntal H, Sharma V.

OMICS. 2011 Nov;15(11):783-9. doi: 10.1089/omi.2011.0074. Epub 2011 Oct 19.

PMID:
22011339
5.

Distinct patterns of simple sequence repeats and GC distribution in intragenic and intergenic regions of primate genomes.

Qi WH, Yan CC, Li WJ, Jiang XM, Li GZ, Zhang XY, Hu TZ, Li J, Yue BS.

Aging (Albany NY). 2016 Sep 16;8(11):2635-2654. doi: 10.18632/aging.101025.

6.

Microsatellite analysis in organelle genomes of Chlorophyta.

Kuntal H, Sharma V, Daniell H.

Bioinformation. 2012;8(6):255-9. doi: 10.6026/97320630008255. Epub 2012 Mar 31.

7.

Comparative analysis of microsatellites and compound microsatellites in T4-like viruses.

Zhou L, Deng L, Fu Y, Wu X, Zhao X, Chen Y, Li M, Tan Z.

Gene. 2016 Jan 10;575(2 Pt 3):695-701. doi: 10.1016/j.gene.2015.09.053. Epub 2015 Sep 26.

PMID:
26410414
8.

Survey and analysis of simple sequence repeats in the Laccaria bicolor genome, with development of microsatellite markers.

Labbé J, Murat C, Morin E, Le Tacon F, Martin F.

Curr Genet. 2011 Apr;57(2):75-88. doi: 10.1007/s00294-010-0328-9. Epub 2010 Dec 4.

PMID:
21132299
9.

Comparative analysis of microsatellites in chloroplast genomes of lower and higher plants.

George B, Bhatt BS, Awasthi M, George B, Singh AK.

Curr Genet. 2015 Nov;61(4):665-77. doi: 10.1007/s00294-015-0495-9. Epub 2015 May 22.

PMID:
25999216
10.

Genome-Wide Survey and Analysis of Microsatellite Sequences in Bovid Species.

Qi WH, Jiang XM, Du LM, Xiao GS, Hu TZ, Yue BS, Quan QM.

PLoS One. 2015 Jul 21;10(7):e0133667. doi: 10.1371/journal.pone.0133667. eCollection 2015.

11.

The analysis of microsatellites and compound microsatellites in 56 complete genomes of Herpesvirales.

Wu X, Zhou L, Zhao X, Tan Z.

Gene. 2014 Nov 1;551(1):103-9. doi: 10.1016/j.gene.2014.08.054. Epub 2014 Aug 27.

PMID:
25172209
12.

A comparative analysis of distribution and conservation of microsatellites in the transcripts of sequenced Fusarium species and development of genic-SSR markers for polymorphism analysis.

Mahfooz S, Srivastava A, Srivastava AK, Arora DK.

FEMS Microbiol Lett. 2015 Sep;362(17):fnv131. doi: 10.1093/femsle/fnv131. Epub 2015 Aug 12.

PMID:
26269381
13.

Genome wide survey and analysis of small repetitive sequences in caulimoviruses.

George B, Gnanasekaran P, Jain SK, Chakraborty S.

Infect Genet Evol. 2014 Oct;27:15-24. doi: 10.1016/j.meegid.2014.06.018. Epub 2014 Jul 1.

PMID:
24999243
14.

Genome-wide mining and comparative analysis of microsatellites in three macaque species.

Liu S, Hou W, Sun T, Xu Y, Li P, Yue B, Fan Z, Li J.

Mol Genet Genomics. 2017 Jun;292(3):537-550. doi: 10.1007/s00438-017-1289-1. Epub 2017 Feb 3.

PMID:
28160080
15.

Comparison of simple sequence repeats in 19 Archaea.

Trivedi S.

Genet Mol Res. 2006 Dec 5;5(4):741-72.

16.

Development and application of microsatellites in candidate genes related to wood properties in the Chinese white poplar (Populus tomentosa Carr.).

Du Q, Gong C, Pan W, Zhang D.

DNA Res. 2013 Feb;20(1):31-44. doi: 10.1093/dnares/dss031. Epub 2012 Dec 4.

17.

Genome-wide characterization of perfect microsatellites in yak (Bos grunniens).

Ma Z.

Genetica. 2015 Aug;143(4):515-20. doi: 10.1007/s10709-015-9849-y. Epub 2015 Jun 13.

PMID:
26071092
18.

Genome-wide analysis of simple sequence repeats in the model medicinal mushroom Ganoderma lucidum.

Qian J, Xu H, Song J, Xu J, Zhu Y, Chen S.

Gene. 2013 Jan 10;512(2):331-6. doi: 10.1016/j.gene.2012.09.127. Epub 2012 Oct 13.

PMID:
23069850
19.

SSR repeat dynamics in mitochondrial genomes of five domestic animal species.

Shakyawar SK, Joshi BK, Kumar D.

Bioinformation. 2009 Oct 15;4(4):158-63.

20.

Incidence, complexity and diversity of simple sequence repeats across potexvirus genomes.

Alam CM, Singh AK, Sharfuddin C, Ali S.

Gene. 2014 Mar 10;537(2):189-96. doi: 10.1016/j.gene.2014.01.007. Epub 2014 Jan 13.

PMID:
24434368

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