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Serotype analysis of Streptococcus pneumoniae in lung and nasopharyngeal aspirates from children in the Gambia by MassTag PCR.

Tokarz R, Briese T, Morris G, Ideh R, Chimah O, Ebruke B, Desai A, Haq S, Sameroff S, Howie SR, Lipkin WI.

J Clin Microbiol. 2013 Mar;51(3):995-7. doi: 10.1128/JCM.02974-12. Epub 2012 Dec 19.


Nasopharyngeal carriage of individual Streptococcus pneumoniae serotypes during pediatric pneumonia as a means to estimate serotype disease potential.

Greenberg D, Givon-Lavi N, Newman N, Bar-Ziv J, Dagan R.

Pediatr Infect Dis J. 2011 Mar;30(3):227-33. doi: 10.1097/INF.0b013e3181f87802.


Detection and serotyping of Streptococcus pneumoniae from nasopharyngeal samples by PCR-based multiplex assay.

Moreno J, Hernández E, Sanabria O, Castañeda E.

J Clin Microbiol. 2005 Dec;43(12):6152-4.


Evaluation of sequential multiplex PCR for direct detection of multiple serotypes of Streptococcus pneumoniae from nasopharyngeal secretions.

Antonio M, Hakeem I, Sankareh K, Cheung YB, Adegbola RA.

J Med Microbiol. 2009 Mar;58(Pt 3):296-302. doi: 10.1099/jmm.0.006031-0.


Etiology of severe childhood pneumonia in the Gambia, West Africa, determined by conventional and molecular microbiological analyses of lung and pleural aspirate samples.

Howie SR, Morris GA, Tokarz R, Ebruke BE, Machuka EM, Ideh RC, Chimah O, Secka O, Townend J, Dione M, Oluwalana C, Njie M, Jallow M, Hill PC, Antonio M, Greenwood B, Briese T, Mulholland K, Corrah T, Lipkin WI, Adegbola RA.

Clin Infect Dis. 2014 Sep 1;59(5):682-5. doi: 10.1093/cid/ciu384. Epub 2014 May 27.


The Relevance of a Novel Quantitative Assay to Detect up to 40 Major Streptococcus pneumoniae Serotypes Directly in Clinical Nasopharyngeal and Blood Specimens.

Messaoudi M, Milenkov M, Albrich WC, van der Linden MP, Bénet T, Chou M, Sylla M, Barreto Costa P, Richard N, Klugman KP, Endtz HP, Paranhos-Baccalà G, Telles JN.

PLoS One. 2016 Mar 17;11(3):e0151428. doi: 10.1371/journal.pone.0151428. eCollection 2016.


Pneumococcal serotype distribution in 1315 nasopharyngeal swabs from a highly vaccinated cohort of Italian children as detected by RT-PCR.

Pasinato A, Indolfi G, Marchisio P, Valleriani C, Cortimiglia M, Spanevello V, Chiamenti G, Buzzetti R, Resti M, Azzari C; Italian Group for the Study of Bacterial Nasopharyngeal Carriage in Children..

Vaccine. 2014 Mar 10;32(12):1375-81. doi: 10.1016/j.vaccine.2014.01.023. Epub 2014 Jan 28.


Nasopharyngeal carriage of Streptococcus pneumoniae in Gambian infants: a longitudinal study.

Hill PC, Cheung YB, Akisanya A, Sankareh K, Lahai G, Greenwood BM, Adegbola RA.

Clin Infect Dis. 2008 Mar 15;46(6):807-14. doi: 10.1086/528688.


Determination of pneumococcal serotypes/genotypes in nasopharyngeal secretions of otitis media children by multiplex PCR.

Billal DS, Hotomi M, Suzumoto M, Yamauchi K, Arai J, Katsurahara T, Moriyama S, Fujihara K, Yamanaka N.

Eur J Pediatr. 2008 Apr;167(4):401-7. Epub 2007 May 24.


Laboratory-based diagnosis of pneumococcal pneumonia: state of the art and unmet needs.

Vernet G, Saha S, Satzke C, Burgess DH, Alderson M, Maisonneuve JF, Beall BW, Steinhoff MC, Klugman KP.

Clin Microbiol Infect. 2011 May;17 Suppl 3:1-13. doi: 10.1111/j.1469-0691.2011.03496.x.


Transmission of Streptococcus pneumoniae in rural Gambian villages: a longitudinal study.

Hill PC, Townend J, Antonio M, Akisanya B, Ebruke C, Lahai G, Greenwood BM, Adegbola RA.

Clin Infect Dis. 2010 Jun 1;50(11):1468-76. doi: 10.1086/652443.


Dynamics of pneumococcal nasopharyngeal carriage in healthy children attending a day care center in northern Spain. Influence of detection techniques on the results.

Ercibengoa M, Arostegi N, Marimón JM, Alonso M, Pérez-Trallero E.

BMC Infect Dis. 2012 Mar 22;12:69. doi: 10.1186/1471-2334-12-69.


Capsular serotypes and antimicrobial susceptibilities of Streptococcus pneumoniae causing invasive pneumococcal disease from 2009-2012 with an emphasis on serotype 19A in bacteraemic pneumonia and empyema and β-lactam resistance.

Lee MR, Chen CM, Chuang TY, Huang YT, Hsueh PR.

Int J Antimicrob Agents. 2013 Nov;42(5):395-402. doi: 10.1016/j.ijantimicag.2013.07.017. Epub 2013 Sep 6.


Sequential multiplex PCR assay for determining capsular serotypes of colonizing S. pneumoniae.

Jourdain S, Drèze PA, Vandeven J, Verhaegen J, Van Melderen L, Smeesters PR.

BMC Infect Dis. 2011 Apr 20;11:100. doi: 10.1186/1471-2334-11-100.


Community‐acquired bacteremic pneumococcal pneumonia in children: diagnosis and serotyping by real‐time polymerase chain reaction using blood samples.

Resti M, Moriondo M, Cortimiglia M, Indolfi G, Canessa C, Becciolini L, Bartolini E, de Benedictis FM, de Martino M, Azzari C; Italian Group for the Study of Invasive Pneumococcal Disease..

Clin Infect Dis. 2010 Nov 1;51(9):1042-9. doi: 10.1086/656579.


An outbreak of pneumonia associated with S. pneumoniae at a military training facility in Finland in 2006.

Vainio A, Lyytikäinen O, Sihvonen R, Kaijalainen T, Teirilä L, Rantala M, Lehtinen P, Ruuska P, Virolainen A.

APMIS. 2009 Jul;117(7):488-91. doi: 10.1111/j.1600-0463.2009.02463.x.


Direct Streptococcus pneumoniae real-time PCR serotyping from pediatric parapneumonic effusions.

Slinger R, Hyde L, Moldovan I, Chan F, Pernica JM.

BMC Pediatr. 2014 Jul 24;14:189. doi: 10.1186/1471-2431-14-189.


Nasopharyngeal carriage of Streptococcus pneumoniae in Gambian villagers.

Hill PC, Akisanya A, Sankareh K, Cheung YB, Saaka M, Lahai G, Greenwood BM, Adegbola RA.

Clin Infect Dis. 2006 Sep 15;43(6):673-9. Epub 2006 Aug 4.


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