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Items: 1 to 20 of 107


The elongation rate of RNA polymerase II in zebrafish and its significance in the somite segmentation clock.

Hanisch A, Holder MV, Choorapoikayil S, Gajewski M, Özbudak EM, Lewis J.

Development. 2013 Jan 15;140(2):444-53. doi: 10.1242/dev.077230.


Setting the tempo in development: an investigation of the zebrafish somite clock mechanism.

Giudicelli F, Ozbudak EM, Wright GJ, Lewis J.

PLoS Biol. 2007 Jun;5(6):e150.


Analysis of her1 and her7 mutants reveals a spatio temporal separation of the somite clock module.

Choorapoikayil S, Willems B, Ströhle P, Gajewski M.

PLoS One. 2012;7(6):e39073. doi: 10.1371/journal.pone.0039073.


Two linked hairy/Enhancer of split-related zebrafish genes, her1 and her7, function together to refine alternating somite boundaries.

Henry CA, Urban MK, Dill KK, Merlie JP, Page MF, Kimmel CB, Amacher SL.

Development. 2002 Aug;129(15):3693-704.


Completing the set of h/E(spl) cyclic genes in zebrafish: her12 and her15 reveal novel modes of expression and contribute to the segmentation clock.

Shankaran SS, Sieger D, Schröter C, Czepe C, Pauly MC, Laplante MA, Becker TS, Oates AC, Gajewski M.

Dev Biol. 2007 Apr 15;304(2):615-32.


Zebrafish hairy/enhancer of split protein links FGF signaling to cyclic gene expression in the periodic segmentation of somites.

Kawamura A, Koshida S, Hijikata H, Sakaguchi T, Kondoh H, Takada S.

Genes Dev. 2005 May 15;19(10):1156-61.


Priming, initiation and synchronization of the segmentation clock by deltaD and deltaC.

Mara A, Schroeder J, Chalouni C, Holley SA.

Nat Cell Biol. 2007 May;9(5):523-30.


The Her7 node modulates the network topology of the zebrafish segmentation clock via sequestration of the Hes6 hub.

Trofka A, Schwendinger-Schreck J, Brend T, Pontius W, Emonet T, Holley SA.

Development. 2012 Mar;139(5):940-7. doi: 10.1242/dev.073544.


her11 is involved in the somitogenesis clock in zebrafish.

Sieger D, Tautz D, Gajewski M.

Dev Genes Evol. 2004 Aug;214(8):393-406.


Stochastic Regulation of her1/7 Gene Expression Is the Source of Noise in the Zebrafish Somite Clock Counteracted by Notch Signalling.

Jenkins RP, Hanisch A, Soza-Ried C, Sahai E, Lewis J.

PLoS Comput Biol. 2015 Nov 20;11(11):e1004459. doi: 10.1371/journal.pcbi.1004459.


Topology and dynamics of the zebrafish segmentation clock core circuit.

Schröter C, Ares S, Morelli LG, Isakova A, Hens K, Soroldoni D, Gajewski M, Jülicher F, Maerkl SJ, Deplancke B, Oates AC.

PLoS Biol. 2012;10(7):e1001364. doi: 10.1371/journal.pbio.1001364.


Short-lived Her proteins drive robust synchronized oscillations in the zebrafish segmentation clock.

Ay A, Knierer S, Sperlea A, Holland J, Özbudak EM.

Development. 2013 Aug;140(15):3244-53. doi: 10.1242/dev.093278.


The vertebrate segmentation clock.

Giudicelli F, Lewis J.

Curr Opin Genet Dev. 2004 Aug;14(4):407-14. Review.


Paf1 complex homologues are required for Notch-regulated transcription during somite segmentation.

Akanuma T, Koshida S, Kawamura A, Kishimoto Y, Takada S.

EMBO Rep. 2007 Sep;8(9):858-63.


Cooperative function of deltaC and her7 in anterior segment formation.

Oates AC, Mueller C, Ho RK.

Dev Biol. 2005 Apr 1;280(1):133-49.


Zebrafish Mesp family genes, mesp-a and mesp-b are segmentally expressed in the presomitic mesoderm, and Mesp-b confers the anterior identity to the developing somites.

Sawada A, Fritz A, Jiang YJ, Yamamoto A, Yamasu K, Kuroiwa A, Saga Y, Takeda H.

Development. 2000 Apr;127(8):1691-702.


Emergence of traveling waves in the zebrafish segmentation clock.

Ishimatsu K, Takamatsu A, Takeda H.

Development. 2010 May;137(10):1595-9. doi: 10.1242/dev.046888.


Anterior and posterior waves of cyclic her1 gene expression are differentially regulated in the presomitic mesoderm of zebrafish.

Gajewski M, Sieger D, Alt B, Leve C, Hans S, Wolff C, Rohr KB, Tautz D.

Development. 2003 Sep;130(18):4269-78.

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