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Items: 1 to 20 of 101

1.

Reconciliation of sequence data and updated annotation of the genome of Agrobacterium tumefaciens C58, and distribution of a linear chromosome in the genus Agrobacterium.

Slater S, Setubal JC, Goodner B, Houmiel K, Sun J, Kaul R, Goldman BS, Farrand SK, Almeida N Jr, Burr T, Nester E, Rhoads DM, Kadoi R, Ostheimer T, Pride N, Sabo A, Henry E, Telepak E, Cromes L, Harkleroad A, Oliphant L, Pratt-Szegila P, Welch R, Wood D.

Appl Environ Microbiol. 2013 Feb;79(4):1414-7. doi: 10.1128/AEM.03192-12. Epub 2012 Dec 14.

2.

Linear chromosome-generating system of Agrobacterium tumefaciens C58: protelomerase generates and protects hairpin ends.

Huang WM, DaGloria J, Fox H, Ruan Q, Tillou J, Shi K, Aihara H, Aron J, Casjens S.

J Biol Chem. 2012 Jul 20;287(30):25551-63. doi: 10.1074/jbc.M112.369488. Epub 2012 May 10.

3.

Theoretical prediction and experimental verification of protein-coding genes in plant pathogen genome Agrobacterium tumefaciens strain C58.

Wang Q, Lei Y, Xu X, Wang G, Chen LL.

PLoS One. 2012;7(9):e43176. doi: 10.1371/journal.pone.0043176. Epub 2012 Sep 11.

5.

Biochemical characteristics of the novel haloalkane dehalogenase DatA, isolated from the plant pathogen Agrobacterium tumefaciens C58.

Hasan K, Fortova A, Koudelakova T, Chaloupkova R, Ishitsuka M, Nagata Y, Damborsky J, Prokop Z.

Appl Environ Microbiol. 2011 Mar;77(5):1881-4. doi: 10.1128/AEM.02109-10. Epub 2010 Dec 30.

6.

Genomic species are ecological species as revealed by comparative genomics in Agrobacterium tumefaciens.

Lassalle F, Campillo T, Vial L, Baude J, Costechareyre D, Chapulliot D, Shams M, Abrouk D, Lavire C, Oger-Desfeux C, Hommais F, Guéguen L, Daubin V, Muller D, Nesme X.

Genome Biol Evol. 2011;3:762-81. doi: 10.1093/gbe/evr070. Epub 2011 Jul 27.

7.

Genome sequences of three agrobacterium biovars help elucidate the evolution of multichromosome genomes in bacteria.

Slater SC, Goldman BS, Goodner B, Setubal JC, Farrand SK, Nester EW, Burr TJ, Banta L, Dickerman AW, Paulsen I, Otten L, Suen G, Welch R, Almeida NF, Arnold F, Burton OT, Du Z, Ewing A, Godsy E, Heisel S, Houmiel KL, Jhaveri J, Lu J, Miller NM, Norton S, Chen Q, Phoolcharoen W, Ohlin V, Ondrusek D, Pride N, Stricklin SL, Sun J, Wheeler C, Wilson L, Zhu H, Wood DW.

J Bacteriol. 2009 Apr;191(8):2501-11. doi: 10.1128/JB.01779-08. Epub 2009 Feb 27.

8.

Combined genetic and physical map of the complex genome of Agrobacterium tumefaciens.

Goodner BW, Markelz BP, Flanagan MC, Crowell CB Jr, Racette JL, Schilling BA, Halfon LM, Mellors JS, Grabowski G.

J Bacteriol. 1999 Sep;181(17):5160-6.

10.

Molecular analysis of the recA gene of Agrobacterium tumefaciens C58.

Wardhan H, McPherson MJ, Harris CA, Sharma E, Sastry GR.

Gene. 1992 Nov 2;121(1):133-6.

PMID:
1427086
11.

Genome sequence of the arsenite-oxidizing strain Agrobacterium tumefaciens 5A.

Hao X, Lin Y, Johnstone L, Liu G, Wang G, Wei G, McDermott T, Rensing C.

J Bacteriol. 2012 Feb;194(4):903. doi: 10.1128/JB.06585-11.

13.

Study of the organization of the genomes of Escherichia coli, Brucella melitensis and Agrobacterium tumefaciens by insertion of a unique restriction site.

Jumas-Bilak E, Maugard C, Michaux-Charachon S, Allardet-Servent A, Perrin A, O'Callaghan D, Ramuz M.

Microbiology. 1995 Oct;141 ( Pt 10):2425-32.

PMID:
7582002
14.

Complete genome sequencing of Agrobacterium sp. H13-3, the former Rhizobium lupini H13-3, reveals a tripartite genome consisting of a circular and a linear chromosome and an accessory plasmid but lacking a tumor-inducing Ti-plasmid.

Wibberg D, Blom J, Jaenicke S, Kollin F, Rupp O, Scharf B, Schneiker-Bekel S, Sczcepanowski R, Goesmann A, Setubal JC, Schmitt R, Pühler A, Schlüter A.

J Biotechnol. 2011 Aug 20;155(1):50-62. doi: 10.1016/j.jbiotec.2011.01.010. Epub 2011 Feb 15.

PMID:
21329740
16.

Genome sequence of Agrobacterium tumefaciens strain F2, a bioflocculant-producing bacterium.

Li A, Geng J, Cui D, Shu C, Zhang S, Yang J, Xing J, Wang J, Ma F, Hu S.

J Bacteriol. 2011 Oct;193(19):5531. doi: 10.1128/JB.05690-11.

17.

The genome of the natural genetic engineer Agrobacterium tumefaciens C58.

Wood DW, Setubal JC, Kaul R, Monks DE, Kitajima JP, Okura VK, Zhou Y, Chen L, Wood GE, Almeida NF Jr, Woo L, Chen Y, Paulsen IT, Eisen JA, Karp PD, Bovee D Sr, Chapman P, Clendenning J, Deatherage G, Gillet W, Grant C, Kutyavin T, Levy R, Li MJ, McClelland E, Palmieri A, Raymond C, Rouse G, Saenphimmachak C, Wu Z, Romero P, Gordon D, Zhang S, Yoo H, Tao Y, Biddle P, Jung M, Krespan W, Perry M, Gordon-Kamm B, Liao L, Kim S, Hendrick C, Zhao ZY, Dolan M, Chumley F, Tingey SV, Tomb JF, Gordon MP, Olson MV, Nester EW.

Science. 2001 Dec 14;294(5550):2317-23.

18.

Genome sequence of the nicotine-degrading Agrobacterium tumefaciens S33.

Yu W, Li H, Xie K, Huang H, Xie H, Wang S.

J Biotechnol. 2016 Jun 20;228:1-2. doi: 10.1016/j.jbiotec.2016.04.029. Epub 2016 Apr 20.

PMID:
27106695
19.

Genome sequence of the plant pathogen and biotechnology agent Agrobacterium tumefaciens C58.

Goodner B, Hinkle G, Gattung S, Miller N, Blanchard M, Qurollo B, Goldman BS, Cao Y, Askenazi M, Halling C, Mullin L, Houmiel K, Gordon J, Vaudin M, Iartchouk O, Epp A, Liu F, Wollam C, Allinger M, Doughty D, Scott C, Lappas C, Markelz B, Flanagan C, Crowell C, Gurson J, Lomo C, Sear C, Strub G, Cielo C, Slater S.

Science. 2001 Dec 14;294(5550):2323-8.

20.

Evolution of enzymatic activities in the enolase superfamily: galactarate dehydratase III from Agrobacterium tumefaciens C58.

Groninger-Poe FP, Bouvier JT, Vetting MW, Kalyanaraman C, Kumar R, Almo SC, Jacobson MP, Gerlt JA.

Biochemistry. 2014 Jul 1;53(25):4192-203. doi: 10.1021/bi5005377. Epub 2014 Jun 19.

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