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Items: 1 to 20 of 103

1.

An optimized DNA extraction and purification method from dairy manure compost for genetic diversity analysis.

Tian W, Zhang Z, Liu D, Zhou T, Shen Q, Shen B.

World J Microbiol Biotechnol. 2013 May;29(5):815-23. doi: 10.1007/s11274-012-1236-6. Epub 2012 Dec 14.

PMID:
23239373
2.

Comparison of commercial DNA extraction kits for isolation and purification of bacterial and eukaryotic DNA from PAH-contaminated soils.

Mahmoudi N, Slater GF, Fulthorpe RR.

Can J Microbiol. 2011 Aug;57(8):623-8. doi: 10.1139/w11-049. Epub 2011 Aug 4.

PMID:
21815819
3.

Evaluation of extraction and purification methods for obtaining PCR-amplifiable DNA from compost for microbial community analysis.

LaMontagne MG, Michel FC Jr, Holden PA, Reddy CA.

J Microbiol Methods. 2002 May;49(3):255-64.

PMID:
11869790
4.

Comparison of commercial kits for the extraction of DNA from paddy soils.

Knauth S, Schmidt H, Tippkötter R.

Lett Appl Microbiol. 2013 Mar;56(3):222-8. doi: 10.1111/lam.12038. Epub 2013 Feb 4.

5.

Bacterial community structure and diversity in a century-old manure-treated agroecosystem.

Sun HY, Deng SP, Raun WR.

Appl Environ Microbiol. 2004 Oct;70(10):5868-74.

6.

Use of rpoB and 16S rRNA genes to analyse bacterial diversity of a tropical soil using PCR and DGGE.

Peixoto RS, da Costa Coutinho HL, Rumjanek NG, Macrae A, Rosado AS.

Lett Appl Microbiol. 2002;35(4):316-20.

7.

Assessment of bacterial community structure in soil by polymerase chain reaction and denaturing gradient gel electrophoresis.

Gelsomino A, Keijzer-Wolters AC, Cacco G, van Elsas JD.

J Microbiol Methods. 1999 Oct;38(1-2):1-15.

PMID:
10520580
8.

A comparison of the efficiency of five different commercial DNA extraction kits for extraction of DNA from faecal samples.

Claassen S, du Toit E, Kaba M, Moodley C, Zar HJ, Nicol MP.

J Microbiol Methods. 2013 Aug;94(2):103-10. doi: 10.1016/j.mimet.2013.05.008. Epub 2013 May 14.

PMID:
23684993
9.

Comparison of DNA extraction kits for PCR-DGGE analysis of human intestinal microbial communities from fecal specimens.

Ariefdjohan MW, Savaiano DA, Nakatsu CH.

Nutr J. 2010 May 22;9:23. doi: 10.1186/1475-2891-9-23.

10.

Comparison of treatment efficacy and stability of microbial populations between raw and anaerobically treated liquid pig manure, using PCR-DGGE and 16S sequencing.

Bouity-Voubou MD, Frigon JC, Guiot S, Brousseau R.

Can J Microbiol. 2008 Feb;54(2):83-90. doi: 10.1139/w07-120.

PMID:
18388976
11.
12.

Similarity of bacterial communities in sawdust- and straw-amended cow manure composts.

Green SJ, Michel FC Jr, Hadar Y, Minz D.

FEMS Microbiol Lett. 2004 Apr 1;233(1):115-23.

13.

A quantitative analysis of DNA extraction and purification from compost.

Howeler M, Ghiorse WC, Walker LP.

J Microbiol Methods. 2003 Jul;54(1):37-45.

PMID:
12732420
14.

Microbial diversity in fecal samples depends on DNA extraction method: easyMag DNA extraction compared to QIAamp DNA stool mini kit extraction.

Mirsepasi H, Persson S, Struve C, Andersen LO, Petersen AM, Krogfelt KA.

BMC Res Notes. 2014 Jan 21;7:50. doi: 10.1186/1756-0500-7-50.

15.

Commercial DNA extraction kits impact observed microbial community composition in permafrost samples.

Vishnivetskaya TA, Layton AC, Lau MC, Chauhan A, Cheng KR, Meyers AJ, Murphy JR, Rogers AW, Saarunya GS, Williams DE, Pfiffner SM, Biggerstaff JP, Stackhouse BT, Phelps TJ, Whyte L, Sayler GS, Onstott TC.

FEMS Microbiol Ecol. 2014 Jan;87(1):217-30. doi: 10.1111/1574-6941.12219. Epub 2013 Oct 17.

16.

DNA extraction method affects microbial community profiles from soils and sediment.

Carrigg C, Rice O, Kavanagh S, Collins G, O'Flaherty V.

Appl Microbiol Biotechnol. 2007 Dec;77(4):955-64. Epub 2007 Oct 25.

PMID:
17960375
17.

[Biases on community structure during DNA extraction of shrimp intestinal microbiota revealed by high-throughput sequencing].

Wen C, He Y, Xue M, Liang H, Dong J.

Wei Sheng Wu Xue Bao. 2016 Jan 4;56(1):130-42. Chinese.

PMID:
27305787
18.

Improved group-specific PCR primers for denaturing gradient gel electrophoresis analysis of the genetic diversity of complex microbial communities.

Mühling M, Woolven-Allen J, Murrell JC, Joint I.

ISME J. 2008 Apr;2(4):379-92. doi: 10.1038/ismej.2007.97. Epub 2008 Mar 13.

PMID:
18340335
19.

[An efficient method for DNA extraction from compost].

He LH, Zhao Y, Chen MJ, Pan YJ.

Wei Sheng Wu Xue Bao. 2006 Feb;46(1):162-5. Chinese.

PMID:
16579488
20.

Effects of different methods of DNA extraction for activated sludge on the subsequent analysis of bacterial community profiles.

Sun L, Ouyang X, Tang Y, Yang Y, Luo Y.

Water Environ Res. 2012 Feb;84(2):108-14.

PMID:
22515059

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