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Items: 1 to 20 of 459

1.

Cross-biome metagenomic analyses of soil microbial communities and their functional attributes.

Fierer N, Leff JW, Adams BJ, Nielsen UN, Bates ST, Lauber CL, Owens S, Gilbert JA, Wall DH, Caporaso JG.

Proc Natl Acad Sci U S A. 2012 Dec 26;109(52):21390-5. doi: 10.1073/pnas.1215210110. Epub 2012 Dec 10.

2.

Desert farming benefits from microbial potential in arid soils and promotes diversity and plant health.

Köberl M, Müller H, Ramadan EM, Berg G.

PLoS One. 2011;6(9):e24452. doi: 10.1371/journal.pone.0024452. Epub 2011 Sep 2.

3.

Phylogenetic and Functional Diversity of Total (DNA) and Expressed (RNA) Bacterial Communities in Urban Green Infrastructure Bioswale Soils.

Gill AS, Lee A, McGuire KL.

Appl Environ Microbiol. 2017 Aug 1;83(16). pii: e00287-17. doi: 10.1128/AEM.00287-17. Print 2017 Aug 15.

4.

Climate controls prokaryotic community composition in desert soils of the southwestern United States.

McHugh TA, Compson Z, van Gestel N, Hayer M, Ballard L, Haverty M, Hines J, Irvine N, Krassner D, Lyons T, Musta EJ, Schiff M, Zint P, Schwartz E.

FEMS Microbiol Ecol. 2017 Oct 1;93(10). doi: 10.1093/femsec/fix116.

PMID:
28961955
5.

Abiotic factors shape microbial diversity in Sonoran Desert soils.

Andrew DR, Fitak RR, Munguia-Vega A, Racolta A, Martinson VG, Dontsova K.

Appl Environ Microbiol. 2012 Nov;78(21):7527-37. doi: 10.1128/AEM.01459-12. Epub 2012 Aug 10.

6.

Mineral Types and Tree Species Determine the Functional and Taxonomic Structures of Forest Soil Bacterial Communities.

Colin Y, Nicolitch O, Turpault MP, Uroz S.

Appl Environ Microbiol. 2017 Feb 15;83(5). pii: e02684-16. doi: 10.1128/AEM.02684-16. Print 2017 Mar 1.

7.

Functional assays and metagenomic analyses reveals differences between the microbial communities inhabiting the soil horizons of a Norway spruce plantation.

Uroz S, Ioannidis P, Lengelle J, Cébron A, Morin E, Buée M, Martin F.

PLoS One. 2013;8(2):e55929. doi: 10.1371/journal.pone.0055929. Epub 2013 Feb 13.

8.

Comparative metagenomic, phylogenetic and physiological analyses of soil microbial communities across nitrogen gradients.

Fierer N, Lauber CL, Ramirez KS, Zaneveld J, Bradford MA, Knight R.

ISME J. 2012 May;6(5):1007-17. doi: 10.1038/ismej.2011.159. Epub 2011 Dec 1.

9.

Factors Controlling Soil Microbial Biomass and Bacterial Diversity and Community Composition in a Cold Desert Ecosystem: Role of Geographic Scale.

Van Horn DJ, Van Horn ML, Barrett JE, Gooseff MN, Altrichter AE, Geyer KM, Zeglin LH, Takacs-Vesbach CD.

PLoS One. 2013 Jun 18;8(6):e66103. doi: 10.1371/journal.pone.0066103. Print 2013.

10.

Making a living while starving in the dark: metagenomic insights into the energy dynamics of a carbonate cave.

Ortiz M, Legatzki A, Neilson JW, Fryslie B, Nelson WM, Wing RA, Soderlund CA, Pryor BM, Maier RM.

ISME J. 2014 Feb;8(2):478-91. doi: 10.1038/ismej.2013.159. Epub 2013 Sep 12.

12.

Bacterial phylogeny structures soil resistomes across habitats.

Forsberg KJ, Patel S, Gibson MK, Lauber CL, Knight R, Fierer N, Dantas G.

Nature. 2014 May 29;509(7502):612-6. doi: 10.1038/nature13377. Epub 2014 May 21.

13.

Phylogenetic molecular ecological network of soil microbial communities in response to elevated CO2.

Zhou J, Deng Y, Luo F, He Z, Yang Y.

MBio. 2011 Jul 26;2(4). pii: e00122-11. doi: 10.1128/mBio.00122-11. Print 2011.

14.

Bacterial Physiological Adaptations to Contrasting Edaphic Conditions Identified Using Landscape Scale Metagenomics.

Malik AA, Thomson BC, Whiteley AS, Bailey M, Griffiths RI.

MBio. 2017 Jul 5;8(4). pii: e00799-17. doi: 10.1128/mBio.00799-17.

15.

Soil organic matter quantity and quality shape microbial community compositions of subtropical broadleaved forests.

Ding J, Zhang Y, Wang M, Sun X, Cong J, Deng Y, Lu H, Yuan T, Van Nostrand JD, Li D, Zhou J, Yang Y.

Mol Ecol. 2015 Oct;24(20):5175-85. doi: 10.1111/mec.13384. Epub 2015 Oct 14.

PMID:
26363284
16.

Changes of soil bacterial diversity as a consequence of agricultural land use in a semi-arid ecosystem.

Ding GC, Piceno YM, Heuer H, Weinert N, Dohrmann AB, Carrillo A, Andersen GL, Castellanos T, Tebbe CC, Smalla K.

PLoS One. 2013;8(3):e59497. doi: 10.1371/journal.pone.0059497. Epub 2013 Mar 20.

17.

Soil bacterial diversity in the Arctic is not fundamentally different from that found in other biomes.

Chu H, Fierer N, Lauber CL, Caporaso JG, Knight R, Grogan P.

Environ Microbiol. 2010 Nov;12(11):2998-3006. doi: 10.1111/j.1462-2920.2010.02277.x. Erratum in: Environ Microbiol. 2011 Mar;13(3):833.

PMID:
20561020
18.

Significant Impacts of Increasing Aridity on the Arid Soil Microbiome.

Neilson JW, Califf K, Cardona C, Copeland A, van Treuren W, Josephson KL, Knight R, Gilbert JA, Quade J, Caporaso JG, Maier RM.

mSystems. 2017 May 30;2(3). pii: e00195-16. doi: 10.1128/mSystems.00195-16. eCollection 2017 May-Jun.

19.

Active and total microbial communities in forest soil are largely different and highly stratified during decomposition.

Baldrian P, Kolařík M, Stursová M, Kopecký J, Valášková V, Větrovský T, Zifčáková L, Snajdr J, Rídl J, Vlček C, Voříšková J.

ISME J. 2012 Feb;6(2):248-58. doi: 10.1038/ismej.2011.95. Epub 2011 Jul 21.

20.

Diversity and Ecology of Viruses in Hyperarid Desert Soils.

Zablocki O, Adriaenssens EM, Cowan D.

Appl Environ Microbiol. 2015 Nov 20;82(3):770-7. doi: 10.1128/AEM.02651-15. Print 2016 Feb 1. Review.

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