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Items: 1 to 20 of 87


The structure and repertoire of small interfering RNAs in Leishmania (Viannia) braziliensis reveal diversification in the trypanosomatid RNAi pathway.

Atayde VD, Shi H, Franklin JB, Carriero N, Notton T, Lye LF, Owens K, Beverley SM, Tschudi C, Ullu E.

Mol Microbiol. 2013 Feb;87(3):580-93. doi: 10.1111/mmi.12117. Epub 2012 Dec 26.


Role of the Trypanosoma brucei HEN1 family methyltransferase in small interfering RNA modification.

Shi H, Barnes RL, Carriero N, Atayde VD, Tschudi C, Ullu E.

Eukaryot Cell. 2014 Jan;13(1):77-86. doi: 10.1128/EC.00233-13. Epub 2013 Nov 1.


Comparative genomics reveals two novel RNAi factors in Trypanosoma brucei and provides insight into the core machinery.

Barnes RL, Shi H, Kolev NG, Tschudi C, Ullu E.

PLoS Pathog. 2012;8(5):e1002678. doi: 10.1371/journal.ppat.1002678. Epub 2012 May 24.


Small interfering RNA-producing loci in the ancient parasitic eukaryote Trypanosoma brucei.

Tschudi C, Shi H, Franklin JB, Ullu E.

BMC Genomics. 2012 Aug 27;13:427.


A single-cloning-step procedure for the generation of RNAi plasmids producing long stem-loop RNA.

Atayde VD, Ullu E, Kolev NG.

Mol Biochem Parasitol. 2012 Jul;184(1):55-8. doi: 10.1016/j.molbiopara.2012.04.003. Epub 2012 Apr 20.


RNA interference in protozoan parasites: achievements and challenges.

Kolev NG, Tschudi C, Ullu E.

Eukaryot Cell. 2011 Sep;10(9):1156-63. doi: 10.1128/EC.05114-11. Epub 2011 Jul 15. Review.


In vivo analysis of the RNA interference mechanism in Trypanosoma brucei.

Tschudi C, Djikeng A, Shi H, Ullu E.

Methods. 2003 Aug;30(4):304-12.


Genome-wide computational identification of functional RNA elements in Trypanosoma brucei.

Mao Y, Najafabadi HS, Salavati R.

BMC Genomics. 2009 Aug 4;10:355. doi: 10.1186/1471-2164-10-355.


Retention and loss of RNA interference pathways in trypanosomatid protozoans.

Lye LF, Owens K, Shi H, Murta SM, Vieira AC, Turco SJ, Tschudi C, Ullu E, Beverley SM.

PLoS Pathog. 2010 Oct 28;6(10):e1001161. doi: 10.1371/journal.ppat.1001161.


An unusual Dicer-like1 protein fuels the RNA interference pathway in Trypanosoma brucei.

Shi H, Tschudi C, Ullu E.

RNA. 2006 Dec;12(12):2063-72. Epub 2006 Oct 19.


An siRNA ribonucleoprotein is found associated with polyribosomes in Trypanosoma brucei.

Djikeng A, Shi H, Tschudi C, Shen S, Ullu E.

RNA. 2003 Jul;9(7):802-8.


Depletion of newly synthesized Argonaute1 impairs the RNAi response in Trypanosoma brucei.

Shi H, Tschudi C, Ullu E.

RNA. 2007 Jul;13(7):1132-9. Epub 2007 May 25.


Small RNAs derived from tRNAs and rRNAs are highly enriched in exosomes from both old and new world Leishmania providing evidence for conserved exosomal RNA Packaging.

Lambertz U, Oviedo Ovando ME, Vasconcelos EJ, Unrau PJ, Myler PJ, Reiner NE.

BMC Genomics. 2015 Mar 5;16:151. doi: 10.1186/s12864-015-1260-7.


Distinct and overlapping roles for two Dicer-like proteins in the RNA interference pathways of the ancient eukaryote Trypanosoma brucei.

Patrick KL, Shi H, Kolev NG, Ersfeld K, Tschudi C, Ullu E.

Proc Natl Acad Sci U S A. 2009 Oct 20;106(42):17933-8. doi: 10.1073/pnas.0907766106. Epub 2009 Oct 6.


Pseudogene-derived small interference RNAs regulate gene expression in African Trypanosoma brucei.

Wen YZ, Zheng LL, Liao JY, Wang MH, Wei Y, Guo XM, Qu LH, Ayala FJ, Lun ZR.

Proc Natl Acad Sci U S A. 2011 May 17;108(20):8345-50. doi: 10.1073/pnas.1103894108. Epub 2011 Apr 29.


RNA interference: advances and questions.

Ullu E, Djikeng A, Shi H, Tschudi C.

Philos Trans R Soc Lond B Biol Sci. 2002 Jan 29;357(1417):65-70. Review.


Analysis of gene function in Trypanosoma brucei using RNA interference.

Djikeng A, Shen S, Tschudi C, Ullu E.

Methods Mol Biol. 2004;265:73-83.


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