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Items: 1 to 20 of 124

1.

Characterization of the triplet state of hybridization-sensitive DNA probe by using fluorescence correlation spectroscopy.

Shin HS, Okamoto A, Sako Y, Kim SW, Kim SY, Pack CG.

J Phys Chem A. 2013 Jan 10;117(1):27-33. doi: 10.1021/jp307018k. Epub 2012 Dec 21.

PMID:
23210598
2.

Quantitative hybridization kinetics of DNA probes to RNA in solution followed by diffusional fluorescence correlation analysis.

Schwille P, Oehlenschläger F, Walter NG.

Biochemistry. 1996 Aug 6;35(31):10182-93.

PMID:
8756483
3.

Exciton-controlled fluorescence: application to hybridization-sensitive fluorescent DNA probe.

Okamoto A, Ikeda S, Kubota T, Yuki M, Yanagisawa H.

Nucleic Acids Symp Ser (Oxf). 2009;(53):49-50. doi: 10.1093/nass/nrp025.

PMID:
19749254
4.

Role of intersystem crossing in the fluorescence quenching of 2-aminopurine 2'-deoxyriboside in solution.

Reichardt C, Wen C, Vogt RA, Crespo-Hernández CE.

Photochem Photobiol Sci. 2013 Aug;12(8):1341-50. doi: 10.1039/c3pp25437b. Erratum in: Photochem Photobiol Sci. 2013 Dec;12(12):2203.

PMID:
23529277
5.

Hybridization kinetics of double-stranded DNA probes for rapid molecular analysis.

Gidwani V, Riahi R, Zhang DD, Wong PK.

Analyst. 2009 Aug;134(8):1675-81. doi: 10.1039/b906077d. Epub 2009 May 22.

PMID:
20448937
6.

Hybridization-sensitive on-off DNA probe: application of the exciton coupling effect to effective fluorescence quenching.

Ikeda S, Okamoto A.

Chem Asian J. 2008 Jun 2;3(6):958-68. doi: 10.1002/asia.200800014.

PMID:
18446920
7.

Dual fluorophore PNA FIT-probes--extremely responsive and bright hybridization probes for the sensitive detection of DNA and RNA.

Socher E, Knoll A, Seitz O.

Org Biomol Chem. 2012 Sep 28;10(36):7363-71. doi: 10.1039/c2ob25925g.

PMID:
22864341
8.

ECHO-LNA conjugates: hybridization-sensitive fluorescence and its application to fluorescent detection of various RNA strands.

Sugizaki K, Okamoto A.

Bioconjug Chem. 2010 Dec 15;21(12):2276-81. doi: 10.1021/bc1002949. Epub 2010 Nov 19.

PMID:
21090641
9.

Molecular basis of action of HyBeacon fluorogenic probes: a spectroscopic and molecular dynamics study.

Marks AH, Bhadra PK, McDowell DG, French DJ, Douglas KT, Bichenkova EV, Bryce RA.

J Biomol Struct Dyn. 2005 Aug;23(1):49-62.

PMID:
15918676
10.

Detection of DNA base variation and cytosine methylation at a single nucleotide site using a highly sensitive fluorescent probe.

Duprey JL, Zhao ZY, Bassani DM, Manchester J, Vyle JS, Tucker JH.

Chem Commun (Camb). 2011 Jun 21;47(23):6629-31. doi: 10.1039/c1cc11205h. Epub 2011 May 12.

PMID:
21562680
11.

Triplet-state investigations of fluorescent dyes at dielectric interfaces using total internal reflection fluorescence correlation spectroscopy.

Blom H, Chmyrov A, Hassler K, Davis LM, Widengren J.

J Phys Chem A. 2009 May 14;113(19):5554-66. doi: 10.1021/jp8110088.

PMID:
19374408
12.

Dual color fluorescence quantitative detection of specific single-stranded DNA with molecular beacons and nucleic acid dye SYBR Green I.

Xiang DS, Zhou GH, Luo M, Ji XH, He ZK.

Analyst. 2012 Aug 21;137(16):3787-93. doi: 10.1039/c2an35262a. Epub 2012 Jul 4.

PMID:
22763945
13.

Hybridization-sensitive fluorescent DNA probe with self-avoidance ability.

Ikeda S, Kubota T, Yuki M, Yanagisawa H, Tsuruma S, Okamoto A.

Org Biomol Chem. 2010 Feb 7;8(3):546-51. doi: 10.1039/b917321h. Epub 2009 Dec 7.

PMID:
20090970
14.

Monitoring molecular beacon DNA probe hybridization at the single-molecule level.

Yao G, Fang X, Yokota H, Yanagida T, Tan W.

Chemistry. 2003 Nov 21;9(22):5686-92.

PMID:
14639652
15.

Structure and dynamics in DNA looped domains: CAG triplet repeat sequence dynamics probed by 2-aminopurine fluorescence.

Lee BJ, Barch M, Castner EW Jr, Völker J, Breslauer KJ.

Biochemistry. 2007 Sep 25;46(38):10756-66. Epub 2007 Aug 25.

PMID:
17718541
16.

Base-by-base dynamics in DNA hybridization probed by fluorescence correlation spectroscopy.

Chen X, Zhou Y, Qu P, Zhao XS.

J Am Chem Soc. 2008 Dec 17;130(50):16947-52. doi: 10.1021/ja804628x.

PMID:
19053418
17.
19.

Molecular beacon-style hybridization assay for quantitative analysis of surface invasive cleavage reactions.

Lockett MR, Shortreed MR, Smith LM.

Anal Chem. 2007 Aug 1;79(15):6031-6. Epub 2007 Jun 27.

PMID:
17595056
20.

Synthesis of hairpin probe using deoxyguanosine as a quencher: Fluorescence and hybridization studies.

Misra A, Kumar P, Gupta KC.

Anal Biochem. 2007 May 1;364(1):86-8. Epub 2007 Feb 13. No abstract available.

PMID:
17350585

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