Format
Sort by
Items per page

Send to

Choose Destination

Links from PubMed

Items: 1 to 20 of 149

1.

Network rewiring is an important mechanism of gene essentiality change.

Kim J, Kim I, Han SK, Bowie JU, Kim S.

Sci Rep. 2012;2:900. doi: 10.1038/srep00900. Epub 2012 Nov 29.

2.

Understanding gene essentiality by finely characterizing hubs in the yeast protein interaction network.

Pang K, Sheng H, Ma X.

Biochem Biophys Res Commun. 2010 Oct 8;401(1):112-6. doi: 10.1016/j.bbrc.2010.09.021. Epub 2010 Sep 15.

PMID:
20833129
3.

Localized network centrality and essentiality in the yeast-protein interaction network.

Park K, Kim D.

Proteomics. 2009 Nov;9(22):5143-54. doi: 10.1002/pmic.200900357.

PMID:
19771559
4.

Why do hubs in the yeast protein interaction network tend to be essential: reexamining the connection between the network topology and essentiality.

Zotenko E, Mestre J, O'Leary DP, Przytycka TM.

PLoS Comput Biol. 2008 Aug 1;4(8):e1000140. doi: 10.1371/journal.pcbi.1000140.

5.

All or nothing: protein complexes flip essentiality between distantly related eukaryotes.

Ryan CJ, Krogan NJ, Cunningham P, Cagney G.

Genome Biol Evol. 2013;5(6):1049-59. doi: 10.1093/gbe/evt074.

6.

Why do hubs tend to be essential in protein networks?

He X, Zhang J.

PLoS Genet. 2006 Jun 2;2(6):e88. Epub 2006 Apr 26.

7.

Essentiality is an emergent property of metabolic network wiring.

Palumbo MC, Colosimo A, Giuliani A, Farina L.

FEBS Lett. 2007 May 29;581(13):2485-9. Epub 2007 May 2.

8.

Predicting essential genes based on network and sequence analysis.

Hwang YC, Lin CC, Chang JY, Mori H, Juan HF, Huang HC.

Mol Biosyst. 2009 Dec;5(12):1672-8. doi: 10.1039/B900611G.

PMID:
19452048
9.

Evolutionary rates and centrality in the yeast gene regulatory network.

Jovelin R, Phillips PC.

Genome Biol. 2009;10(4):R35. doi: 10.1186/gb-2009-10-4-r35. Epub 2009 Apr 9.

10.

Uncovering hidden relationships.

Eisenstein M.

Nat Methods. 2005 Nov;2(11):806.

PMID:
16281355
11.

Characterization of essential genes by topological properties in the perturbation sensitivity network.

Yang L, Wang J, Wang H, Lv Y, Zuo Y, Jiang W.

Biochem Biophys Res Commun. 2014 Jun 13;448(4):473-9. doi: 10.1016/j.bbrc.2014.04.136. Epub 2014 May 4.

PMID:
24802397
12.

Evolutionary plasticity of genetic interaction networks.

Tischler J, Lehner B, Fraser AG.

Nat Genet. 2008 Apr;40(4):390-1. doi: 10.1038/ng.114. Epub 2008 Mar 23.

PMID:
18362882
13.

Gene essentiality and the topology of protein interaction networks.

Coulomb S, Bauer M, Bernard D, Marsolier-Kergoat MC.

Proc Biol Sci. 2005 Aug 22;272(1573):1721-5.

14.

Evolutionary rate heterogeneity of core and attachment proteins in yeast protein complexes.

Chakraborty S, Ghosh TC.

Genome Biol Evol. 2013;5(7):1366-75. doi: 10.1093/gbe/evt096.

15.

The role of protein interactions in mediating essentiality and synthetic lethality.

Talavera D, Robertson DL, Lovell SC.

PLoS One. 2013 Apr 29;8(4):e62866. doi: 10.1371/journal.pone.0062866. Print 2013.

16.

The synthetic genetic interaction spectrum of essential genes.

Davierwala AP, Haynes J, Li Z, Brost RL, Robinson MD, Yu L, Mnaimneh S, Ding H, Zhu H, Chen Y, Cheng X, Brown GW, Boone C, Andrews BJ, Hughes TR.

Nat Genet. 2005 Oct;37(10):1147-52. Epub 2005 Sep 11.

17.

The evolutionary dynamics of the Saccharomyces cerevisiae protein interaction network after duplication.

Presser A, Elowitz MB, Kellis M, Kishony R.

Proc Natl Acad Sci U S A. 2008 Jan 22;105(3):950-4. doi: 10.1073/pnas.0707293105. Epub 2008 Jan 16.

18.

A local average connectivity-based method for identifying essential proteins from the network level.

Li M, Wang J, Chen X, Wang H, Pan Y.

Comput Biol Chem. 2011 Jun;35(3):143-50. doi: 10.1016/j.compbiolchem.2011.04.002. Epub 2011 Apr 30.

PMID:
21704260
19.

Metabolic network analysis of the causes and evolution of enzyme dispensability in yeast.

Papp B, Pál C, Hurst LD.

Nature. 2004 Jun 10;429(6992):661-4.

PMID:
15190353
20.

Divergence of transcription factor binding sites across related yeast species.

Borneman AR, Gianoulis TA, Zhang ZD, Yu H, Rozowsky J, Seringhaus MR, Wang LY, Gerstein M, Snyder M.

Science. 2007 Aug 10;317(5839):815-9.

Supplemental Content

Support Center