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Items: 1 to 20 of 103

1.

SecReT4: a web-based bacterial type IV secretion system resource.

Bi D, Liu L, Tai C, Deng Z, Rajakumar K, Ou HY.

Nucleic Acids Res. 2013 Jan;41(Database issue):D660-5. doi: 10.1093/nar/gks1248. Epub 2012 Nov 28.

2.

ICEberg: a web-based resource for integrative and conjugative elements found in Bacteria.

Bi D, Xu Z, Harrison EM, Tai C, Wei Y, He X, Jia S, Deng Z, Rajakumar K, Ou HY.

Nucleic Acids Res. 2012 Jan;40(Database issue):D621-6. doi: 10.1093/nar/gkr846. Epub 2011 Oct 18.

3.

TADB: a web-based resource for Type 2 toxin-antitoxin loci in bacteria and archaea.

Shao Y, Harrison EM, Bi D, Tai C, He X, Ou HY, Rajakumar K, Deng Z.

Nucleic Acids Res. 2011 Jan;39(Database issue):D606-11. doi: 10.1093/nar/gkq908. Epub 2010 Oct 6.

4.

SecReT6: a web-based resource for type VI secretion systems found in bacteria.

Li J, Yao Y, Xu HH, Hao L, Deng Z, Rajakumar K, Ou HY.

Environ Microbiol. 2015 Jul;17(7):2196-202. doi: 10.1111/1462-2920.12794.

PMID:
25640659
5.

AtlasT4SS: a curated database for type IV secretion systems.

Souza RC, del Rosario Quispe Saji G, Costa MO, Netto DS, Lima NC, Klein CC, Vasconcelos AT, Nicolás MF.

BMC Microbiol. 2012 Aug 9;12:172. doi: 10.1186/1471-2180-12-172.

6.

Peptidomimetic Small Molecules Disrupt Type IV Secretion System Activity in Diverse Bacterial Pathogens.

Shaffer CL, Good JA, Kumar S, Krishnan KS, Gaddy JA, Loh JT, Chappell J, Almqvist F, Cover TL, Hadjifrangiskou M.

MBio. 2016 Apr 26;7(2):e00221-16. doi: 10.1128/mBio.00221-16.

7.

dndDB: a database focused on phosphorothioation of the DNA backbone.

Ou HY, He X, Shao Y, Tai C, Rajakumar K, Deng Z.

PLoS One. 2009;4(4):e5132. doi: 10.1371/journal.pone.0005132. Epub 2009 Apr 9.

8.

Mechanism and structure of the bacterial type IV secretion systems.

Christie PJ, Whitaker N, González-Rivera C.

Biochim Biophys Acta. 2014 Aug;1843(8):1578-91. doi: 10.1016/j.bbamcr.2013.12.019. Epub 2014 Jan 2. Review.

9.

Prediction of bacterial type IV secreted effectors by C-terminal features.

Wang Y, Wei X, Bao H, Liu SL.

BMC Genomics. 2014 Jan 21;15:50. doi: 10.1186/1471-2164-15-50.

10.

T4SP Database 2.0: An Improved Database for Type IV Secretion Systems in Bacterial Genomes with New Online Analysis Tools.

Han N, Yu W, Qiang Y, Zhang W.

Comput Math Methods Med. 2016;2016:9415459. Epub 2016 Sep 21.

11.

An anomalous type IV secretion system in Rickettsia is evolutionarily conserved.

Gillespie JJ, Ammerman NC, Dreher-Lesnick SM, Rahman MS, Worley MJ, Setubal JC, Sobral BS, Azad AF.

PLoS One. 2009;4(3):e4833. doi: 10.1371/journal.pone.0004833. Epub 2009 Mar 12.

12.

The expanding bacterial type IV secretion lexicon.

Bhatty M, Laverde Gomez JA, Christie PJ.

Res Microbiol. 2013 Jul-Aug;164(6):620-39. doi: 10.1016/j.resmic.2013.03.012. Epub 2013 Mar 28. Review.

13.

The Mosaic Type IV Secretion Systems.

Christie PJ.

EcoSal Plus. 2016 Oct;7(1). doi: 10.1128/ecosalplus.ESP-0020-2015. Review.

14.

T3DB: an integrated database for bacterial type III secretion system.

Wang Y, Huang H, Sun M, Zhang Q, Guo D.

BMC Bioinformatics. 2012 Apr 30;13:66. doi: 10.1186/1471-2105-13-66.

15.

Type IV secretion systems and their effectors in bacterial pathogenesis.

Backert S, Meyer TF.

Curr Opin Microbiol. 2006 Apr;9(2):207-17. Epub 2006 Mar 9. Review.

PMID:
16529981
16.

Type IV secretion systems: tools of bacterial horizontal gene transfer and virulence.

Juhas M, Crook DW, Hood DW.

Cell Microbiol. 2008 Dec;10(12):2377-86. doi: 10.1111/j.1462-5822.2008.01187.x. Epub 2008 Jun 10. Review.

17.

Two type IV secretion systems with different functions in Burkholderia cenocepacia K56-2.

Zhang R, LiPuma JJ, Gonzalez CF.

Microbiology. 2009 Dec;155(Pt 12):4005-13. doi: 10.1099/mic.0.033043-0. Epub 2009 Sep 10.

PMID:
19744991
18.

T3SEdb: data warehousing of virulence effectors secreted by the bacterial Type III Secretion System.

Tay DM, Govindarajan KR, Khan AM, Ong TY, Samad HM, Soh WW, Tong M, Zhang F, Tan TW.

BMC Bioinformatics. 2010 Oct 15;11 Suppl 7:S4. doi: 10.1186/1471-2105-11-S7-S4.

19.

Type IV secretion systems: versatility and diversity in function.

Wallden K, Rivera-Calzada A, Waksman G.

Cell Microbiol. 2010 Sep 1;12(9):1203-12. doi: 10.1111/j.1462-5822.2010.01499.x. Epub 2010 Jul 16. Review.

20.

Computational prediction of secretion systems and secretomes of Brucella: identification of novel type IV effectors and their interaction with the host.

Sankarasubramanian J, Vishnu US, Dinakaran V, Sridhar J, Gunasekaran P, Rajendhran J.

Mol Biosyst. 2016 Jan;12(1):178-90. doi: 10.1039/c5mb00607d. Epub 2015 Nov 17.

PMID:
26575364

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