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Abundance and short-term temporal variability of fecal microbiota in healthy dogs.

Garcia-Mazcorro JF, Dowd SE, Poulsen J, Steiner JM, Suchodolski JS.

Microbiologyopen. 2012 Sep;1(3):340-7. doi: 10.1002/mbo3.36. Epub 2012 Sep 3.


Effect of the proton pump inhibitor omeprazole on the gastrointestinal bacterial microbiota of healthy dogs.

Garcia-Mazcorro JF, Suchodolski JS, Jones KR, Clark-Price SC, Dowd SE, Minamoto Y, Markel M, Steiner JM, Dossin O.

FEMS Microbiol Ecol. 2012 Jun;80(3):624-36. doi: 10.1111/j.1574-6941.2012.01331.x. Epub 2012 Mar 12.


The effect of the macrolide antibiotic tylosin on microbial diversity in the canine small intestine as demonstrated by massive parallel 16S rRNA gene sequencing.

Suchodolski JS, Dowd SE, Westermarck E, Steiner JM, Wolcott RD, Spillmann T, Harmoinen JA.

BMC Microbiol. 2009 Oct 2;9:210. doi: 10.1186/1471-2180-9-210.


Molecular assessment of the fecal microbiota in healthy cats and dogs before and during supplementation with fructo-oligosaccharides (FOS) and inulin using high-throughput 454-pyrosequencing.

Garcia-Mazcorro JF, Barcenas-Walls JR, Suchodolski JS, Steiner JM.

PeerJ. 2017 Apr 18;5:e3184. doi: 10.7717/peerj.3184. eCollection 2017.


Effect of a multi-species synbiotic formulation on fecal bacterial microbiota of healthy cats and dogs as evaluated by pyrosequencing.

Garcia-Mazcorro JF, Lanerie DJ, Dowd SE, Paddock CG, Grützner N, Steiner JM, Ivanek R, Suchodolski JS.

FEMS Microbiol Ecol. 2011 Dec;78(3):542-54. doi: 10.1111/j.1574-6941.2011.01185.x. Epub 2011 Sep 8.


[Specificity comparison of three Feacalibacterium prausnitzii-specific PCR primer pairs].

Feng J, Hua W, Zhao L, Zhao Y, Shen J.

Wei Sheng Wu Xue Bao. 2011 Jun;51(6):819-27. Chinese.


Composition, variability, and temporal stability of the intestinal microbiota of the elderly.

Claesson MJ, Cusack S, O'Sullivan O, Greene-Diniz R, de Weerd H, Flannery E, Marchesi JR, Falush D, Dinan T, Fitzgerald G, Stanton C, van Sinderen D, O'Connor M, Harnedy N, O'Connor K, Henry C, O'Mahony D, Fitzgerald AP, Shanahan F, Twomey C, Hill C, Ross RP, O'Toole PW.

Proc Natl Acad Sci U S A. 2011 Mar 15;108 Suppl 1:4586-91. doi: 10.1073/pnas.1000097107. Epub 2010 Jun 22.


Characterization of microbial dysbiosis and metabolomic changes in dogs with acute diarrhea.

Guard BC, Barr JW, Reddivari L, Klemashevich C, Jayaraman A, Steiner JM, Vanamala J, Suchodolski JS.

PLoS One. 2015 May 22;10(5):e0127259. doi: 10.1371/journal.pone.0127259. eCollection 2015.


Low counts of Faecalibacterium prausnitzii in colitis microbiota.

Sokol H, Seksik P, Furet JP, Firmesse O, Nion-Larmurier I, Beaugerie L, Cosnes J, Corthier G, Marteau P, Doré J.

Inflamm Bowel Dis. 2009 Aug;15(8):1183-9. doi: 10.1002/ibd.20903.


Biostructure of fecal microbiota in healthy subjects and patients with chronic idiopathic diarrhea.

Swidsinski A, Loening-Baucke V, Verstraelen H, Osowska S, Doerffel Y.

Gastroenterology. 2008 Aug;135(2):568-79. doi: 10.1053/j.gastro.2008.04.017. Epub 2008 Apr 18.


Microbiota composition of the intestinal mucosa: association with fecal microbiota?

Ouwehand AC, Salminen S, Arvola T, Ruuska T, Isolauri E.

Microbiol Immunol. 2004;48(7):497-500.


Massive parallel 16S rRNA gene pyrosequencing reveals highly diverse fecal bacterial and fungal communities in healthy dogs and cats.

Handl S, Dowd SE, Garcia-Mazcorro JF, Steiner JM, Suchodolski JS.

FEMS Microbiol Ecol. 2011 May;76(2):301-10. doi: 10.1111/j.1574-6941.2011.01058.x. Epub 2011 Feb 14.


Comparison of viable cell counts and fluorescence in situ hybridization using specific rRNA-based probes for the quantification of human fecal bacteria.

Harmsen HJ, Gibson GR, Elfferich P, Raangs GC, Wildeboer-Veloo AC, Argaiz A, Roberfroid MB, Welling GW.

FEMS Microbiol Lett. 2000 Feb 1;183(1):125-9.


Development and analytic validation of an immunoassay for the quantification of canine S100A12 in serum and fecal samples and its biological variability in serum from healthy dogs.

Heilmann RM, Lanerie DJ, Ruaux CG, Grützner N, Suchodolski JS, Steiner JM.

Vet Immunol Immunopathol. 2011 Dec 15;144(3-4):200-9. doi: 10.1016/j.vetimm.2011.09.011. Epub 2011 Oct 6.


Faecal microbiota composition in vegetarians: comparison with omnivores in a cohort of young women in southern India.

Kabeerdoss J, Devi RS, Mary RR, Ramakrishna BS.

Br J Nutr. 2012 Sep 28;108(6):953-7. doi: 10.1017/S0007114511006362. Epub 2011 Dec 20.


Design and validation of 16S rRNA probes to enumerate members of the Clostridium leptum subgroup in human faecal microbiota.

Lay C, Sutren M, Rochet V, Saunier K, Doré J, Rigottier-Gois L.

Environ Microbiol. 2005 Jul;7(7):933-46.


Specificities of the fecal microbiota in inflammatory bowel disease.

Sokol H, Seksik P, Rigottier-Gois L, Lay C, Lepage P, Podglajen I, Marteau P, Doré J.

Inflamm Bowel Dis. 2006 Feb;12(2):106-11.


Smokers with active Crohn's disease have a clinically relevant dysbiosis of the gastrointestinal microbiota.

Benjamin JL, Hedin CR, Koutsoumpas A, Ng SC, McCarthy NE, Prescott NJ, Pessoa-Lopes P, Mathew CG, Sanderson J, Hart AL, Kamm MA, Knight SC, Forbes A, Stagg AJ, Lindsay JO, Whelan K.

Inflamm Bowel Dis. 2012 Jun;18(6):1092-100. doi: 10.1002/ibd.21864. Epub 2011 Aug 29.


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