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Items: 1 to 20 of 151

1.

Large-scale sequencing based on full-length-enriched cDNA libraries in pigs: contribution to annotation of the pig genome draft sequence.

Uenishi H, Morozumi T, Toki D, Eguchi-Ogawa T, Rund LA, Schook LB.

BMC Genomics. 2012 Nov 15;13:581. doi: 10.1186/1471-2164-13-581.

2.

Characterization of 954 bovine full-CDS cDNA sequences.

Harhay GP, Sonstegard TS, Keele JW, Heaton MP, Clawson ML, Snelling WM, Wiedmann RT, Van Tassell CP, Smith TP.

BMC Genomics. 2005 Nov 23;6:166.

3.

Chicken genomics resource: sequencing and annotation of 35,407 ESTs from single and multiple tissue cDNA libraries and CAP3 assembly of a chicken gene index.

Carre W, Wang X, Porter TE, Nys Y, Tang J, Bernberg E, Morgan R, Burnside J, Aggrey SE, Simon J, Cogburn LA.

Physiol Genomics. 2006 May 16;25(3):514-24. Epub 2006 Mar 22.

PMID:
16554550
4.

A new set of ESTs and cDNA clones from full-length and normalized libraries for gene discovery and functional characterization in citrus.

Marques MC, Alonso-Cantabrana H, Forment J, Arribas R, Alamar S, Conejero V, Perez-Amador MA.

BMC Genomics. 2009 Sep 11;10:428. doi: 10.1186/1471-2164-10-428.

5.

Generation and analysis of large-scale expressed sequence tags (ESTs) from a full-length enriched cDNA library of porcine backfat tissue.

Kim TH, Kim NS, Lim D, Lee KT, Oh JH, Park HS, Jang GW, Kim HY, Jeon M, Choi BH, Lee HY, Chung HY, Kim H.

BMC Genomics. 2006 Feb 27;7:36.

6.

PEDE (Pig EST Data Explorer) has been expanded into Pig Expression Data Explorer, including 10 147 porcine full-length cDNA sequences.

Uenishi H, Eguchi-Ogawa T, Shinkai H, Okumura N, Suzuki K, Toki D, Hamasima N, Awata T.

Nucleic Acids Res. 2007 Jan;35(Database issue):D650-3. Epub 2006 Dec 1.

7.

Construction and EST sequencing of full-length, drought stress cDNA libraries for common beans (Phaseolus vulgaris L.).

Blair MW, Fernandez AC, Ishitani M, Moreta D, Seki M, Ayling S, Shinozaki K.

BMC Plant Biol. 2011 Nov 25;11:171. doi: 10.1186/1471-2229-11-171.

8.

Reporting 678 putative cSNPs from full-length enriched cDNA sequences of the Korean native pig.

Park K, Dirisala VR, Oh Y, Choi H, Lee KT, Kim JH, Lee HT, Seo KH, Park C.

J Anim Breed Genet. 2009 Apr;126(2):127-33. doi: 10.1111/j.1439-0388.2008.00765.x.

PMID:
19320769
9.

EST-based gene discovery in pig: virtual expression patterns and comparative mapping to human.

Tuggle CK, Green JA, Fitzsimmons C, Woods R, Prather RS, Malchenko S, Soares BM, Kucaba T, Crouch K, Smith C, Tack D, Robinson N, O'Leary B, Scheetz T, Casavant T, Pomp D, Edeal BJ, Zhang Y, Rothschild MF, Garwood K, Beavis W.

Mamm Genome. 2003 Aug;14(8):565-79.

PMID:
12925889
10.

Sequencing and analysis of approximately 40,000 soybean cDNA clones from a full-length-enriched cDNA library.

Umezawa T, Sakurai T, Totoki Y, Toyoda A, Seki M, Ishiwata A, Akiyama K, Kurotani A, Yoshida T, Mochida K, Kasuga M, Todaka D, Maruyama K, Nakashima K, Enju A, Mizukado S, Ahmed S, Yoshiwara K, Harada K, Tsubokura Y, Hayashi M, Sato S, Anai T, Ishimoto M, Funatsuki H, Teraishi M, Osaki M, Shinano T, Akashi R, Sakaki Y, Yamaguchi-Shinozaki K, Shinozaki K.

DNA Res. 2008 Dec;15(6):333-46. doi: 10.1093/dnares/dsn024. Epub 2008 Oct 16.

12.

Functional annotation of 19,841 Populus nigra full-length enriched cDNA clones.

Nanjo T, Sakurai T, Totoki Y, Toyoda A, Nishiguchi M, Kado T, Igasaki T, Futamura N, Seki M, Sakaki Y, Shinozaki K, Shinohara K.

BMC Genomics. 2007 Dec 3;8:448.

13.

Annotated expressed sequence tags (ESTs) from pre-smolt Atlantic salmon (Salmo salar) in a searchable data resource.

Adzhubei AA, Vlasova AV, Hagen-Larsen H, Ruden TA, Laerdahl JK, Høyheim B.

BMC Genomics. 2007 Jul 2;8:209.

14.

Analysis of expressed sequence tags generated from full-length enriched cDNA libraries of melon.

Clepet C, Joobeur T, Zheng Y, Jublot D, Huang M, Truniger V, Boualem A, Hernandez-Gonzalez ME, Dolcet-Sanjuan R, Portnoy V, Mascarell-Creus A, Caño-Delgado AI, Katzir N, Bendahmane A, Giovannoni JJ, Aranda MA, Garcia-Mas J, Fei Z.

BMC Genomics. 2011 May 20;12:252. doi: 10.1186/1471-2164-12-252.

15.

Generation, annotation, analysis and database integration of 16,500 white spruce EST clusters.

Pavy N, Paule C, Parsons L, Crow JA, Morency MJ, Cooke J, Johnson JE, Noumen E, Guillet-Claude C, Butterfield Y, Barber S, Yang G, Liu J, Stott J, Kirkpatrick R, Siddiqui A, Holt R, Marra M, Seguin A, Retzel E, Bousquet J, MacKay J.

BMC Genomics. 2005 Oct 19;6:144.

16.

PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries.

Uenishi H, Eguchi T, Suzuki K, Sawazaki T, Toki D, Shinkai H, Okumura N, Hamasima N, Awata T.

Nucleic Acids Res. 2004 Jan 1;32(Database issue):D484-8.

17.

Large-scale collection and annotation of full-length enriched cDNAs from a model halophyte, Thellungiella halophila.

Taji T, Sakurai T, Mochida K, Ishiwata A, Kurotani A, Totoki Y, Toyoda A, Sakaki Y, Seki M, Ono H, Sakata Y, Tanaka S, Shinozaki K.

BMC Plant Biol. 2008 Nov 12;8:115. doi: 10.1186/1471-2229-8-115.

18.

Identification of tissue-specific, abiotic stress-responsive gene expression patterns in wine grape (Vitis vinifera L.) based on curation and mining of large-scale EST data sets.

Tillett RL, Ergül A, Albion RL, Schlauch KA, Cramer GR, Cushman JC.

BMC Plant Biol. 2011 May 18;11:86. doi: 10.1186/1471-2229-11-86.

19.

cDNA sequences reveal considerable gene prediction inaccuracy in the Plasmodium falciparum genome.

Lu F, Jiang H, Ding J, Mu J, Valenzuela JG, Ribeiro JM, Su XZ.

BMC Genomics. 2007 Jul 27;8:255.

20.

Gene discovery from Jatropha curcas by sequencing of ESTs from normalized and full-length enriched cDNA library from developing seeds.

Natarajan P, Kanagasabapathy D, Gunadayalan G, Panchalingam J, Shree N, Sugantham PA, Singh KK, Madasamy P.

BMC Genomics. 2010 Oct 27;11:606. doi: 10.1186/1471-2164-11-606.

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