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Items: 1 to 20 of 315

1.

Chloroplast DNA polymorphism and evolutional relationships between Asian cultivated rice (Oryza sativa) and its wild relatives (O. rufipogon).

Li WJ, Zhang B, Huang GW, Kang GP, Liang MZ, Chen LB.

Genet Mol Res. 2012 Dec 17;11(4):4418-31. doi: 10.4238/2012.October.9.8.

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Domestication and geographic origin of Oryza sativa in China: insights from multilocus analysis of nucleotide variation of O. sativa and O. rufipogon.

Wei X, Qiao WH, Chen YT, Wang RS, Cao LR, Zhang WX, Yuan NN, Li ZC, Zeng HL, Yang QW.

Mol Ecol. 2012 Oct;21(20):5073-87. doi: 10.1111/j.1365-294X.2012.05748.x. Epub 2012 Sep 18.

PMID:
22989375
4.

Multilocus analysis of nucleotide variation of Oryza sativa and its wild relatives: severe bottleneck during domestication of rice.

Zhu Q, Zheng X, Luo J, Gaut BS, Ge S.

Mol Biol Evol. 2007 Mar;24(3):875-88. Epub 2007 Jan 11.

PMID:
17218640
5.

Origin of Oryza sativa in China inferred by nucleotide polymorphisms of organelle DNA.

Wei X, Wang R, Cao L, Yuan N, Huang J, Qiao W, Zhang W, Zeng H, Yang Q.

PLoS One. 2012;7(11):e49546. doi: 10.1371/journal.pone.0049546. Epub 2012 Nov 15.

6.

Polyphyletic origin of cultivated rice: based on the interspersion pattern of SINEs.

Cheng C, Motohashi R, Tsuchimoto S, Fukuta Y, Ohtsubo H, Ohtsubo E.

Mol Biol Evol. 2003 Jan;20(1):67-75.

PMID:
12519908
7.
8.

Phylogeography of Asian wild rice, Oryza rufipogon: a genome-wide view.

Huang P, Molina J, Flowers JM, Rubinstein S, Jackson SA, Purugganan MD, Schaal BA.

Mol Ecol. 2012 Sep;21(18):4593-604. doi: 10.1111/j.1365-294X.2012.05625.x. Epub 2012 May 30.

PMID:
22646149
9.

RAPD, RFLP and SSLP analyses of phylogenetic relationships between cultivated and wild species of rice.

Bautista NS, Solis R, Kamijima O, Ishii T.

Genes Genet Syst. 2001 Apr;76(2):71-9.

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[A study of the genetic diversity of common wild rice (O. rufipogon Griff.) and cultivated rice (O. sativa L.) by RFLP analysis].

Sun CQ, Wang XK, Yoshimura A, Iwata N.

Yi Chuan Xue Bao. 2000;27(3):227-34. Chinese.

PMID:
10887694
13.

Gene tree discordance of wild and cultivated Asian rice deciphered by genome-wide sequence comparison.

Yang CC, Sakai H, Numa H, Itoh T.

Gene. 2011 May 15;477(1-2):53-60. doi: 10.1016/j.gene.2011.01.013. Epub 2011 Jan 28.

PMID:
21277362
14.

Genetic variation in the chloroplast genome suggests multiple domestication of cultivated Asian rice (Oryza sativa L.).

Kawakami S, Ebana K, Nishikawa T, Sato Y, Vaughan DA, Kadowaki K.

Genome. 2007 Feb;50(2):180-7.

PMID:
17546083
15.

Molecular evolution of the endosperm starch synthesis pathway genes in rice (Oryza sativa L.) and its wild ancestor, O. rufipogon L.

Yu G, Olsen KM, Schaal BA.

Mol Biol Evol. 2011 Jan;28(1):659-71. doi: 10.1093/molbev/msq243. Epub 2010 Sep 9.

PMID:
20829346
16.

Molecular evidence for a single evolutionary origin of domesticated rice.

Molina J, Sikora M, Garud N, Flowers JM, Rubinstein S, Reynolds A, Huang P, Jackson S, Schaal BA, Bustamante CD, Boyko AR, Purugganan MD.

Proc Natl Acad Sci U S A. 2011 May 17;108(20):8351-6. doi: 10.1073/pnas.1104686108. Epub 2011 May 2.

17.

The extent of linkage disequilibrium in rice (Oryza sativa L.).

Mather KA, Caicedo AL, Polato NR, Olsen KM, McCouch S, Purugganan MD.

Genetics. 2007 Dec;177(4):2223-32. Epub 2007 Oct 18.

18.

Evolutionary analysis of the Sub1 gene cluster that confers submergence tolerance to domesticated rice.

Fukao T, Harris T, Bailey-Serres J.

Ann Bot. 2009 Jan;103(2):143-50. doi: 10.1093/aob/mcn172. Epub 2008 Sep 29.

19.

Phylogeography of Asian wild rice, Oryza rufipogon, reveals multiple independent domestications of cultivated rice, Oryza sativa.

Londo JP, Chiang YC, Hung KH, Chiang TY, Schaal BA.

Proc Natl Acad Sci U S A. 2006 Jun 20;103(25):9578-83. Epub 2006 Jun 9.

20.

Diversity of the Ty-1 copia retrotransposon Tos17 in rice (Oryza sativa L.) and the AA genome of the Oryza genus.

Petit J, Bourgeois E, Stenger W, Bès M, Droc G, Meynard D, Courtois B, Ghesquière A, Sabot F, Panaud O, Guiderdoni E.

Mol Genet Genomics. 2009 Dec;282(6):633-52. doi: 10.1007/s00438-009-0493-z. Epub 2009 Oct 25.

PMID:
19856189

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