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Items: 1 to 20 of 129

1.

Functional modules, structural topology, and optimal activity in metabolic networks.

Resendis-Antonio O, Hernández M, Mora Y, Encarnación S.

PLoS Comput Biol. 2012;8(10):e1002720. doi: 10.1371/journal.pcbi.1002720. Epub 2012 Oct 11.

2.

Systems biology of bacterial nitrogen fixation: high-throughput technology and its integrative description with constraint-based modeling.

Resendis-Antonio O, Hernández M, Salazar E, Contreras S, Batallar GM, Mora Y, Encarnación S.

BMC Syst Biol. 2011 Jul 29;5:120. doi: 10.1186/1752-0509-5-120.

3.

Metabolic reconstruction and modeling of nitrogen fixation in Rhizobium etli.

Resendis-Antonio O, Reed JL, Encarnación S, Collado-Vides J, Palsson BØ.

PLoS Comput Biol. 2007 Oct;3(10):1887-95. Epub 2007 Aug 17.

4.

Characterization of the NifA-RpoN regulon in Rhizobium etli in free life and in symbiosis with Phaseolus vulgaris.

Salazar E, Díaz-Mejía JJ, Moreno-Hagelsieb G, Martínez-Batallar G, Mora Y, Mora J, Encarnación S.

Appl Environ Microbiol. 2010 Jul;76(13):4510-20. doi: 10.1128/AEM.02007-09. Epub 2010 May 7.

5.

Effective symbiosis between Rhizobium etli and Phaseolus vulgaris requires the alarmone ppGpp.

Moris M, Braeken K, Schoeters E, Verreth C, Beullens S, Vanderleyden J, Michiels J.

J Bacteriol. 2005 Aug;187(15):5460-9.

6.

Applying reversible mutations of nodulation and nitrogen-fixation genes to study social cheating in Rhizobium etli-legume interaction.

Ling J, Zheng H, Katzianer DS, Wang H, Zhong Z, Zhu J.

PLoS One. 2013 Jul 26;8(7):e70138. doi: 10.1371/journal.pone.0070138. Print 2013.

7.

The stringent response is required for amino acid and nitrate utilization, nod factor regulation, nodulation, and nitrogen fixation in Rhizobium etli.

Calderón-Flores A, Du Pont G, Huerta-Saquero A, Merchant-Larios H, Servín-González L, Durán S.

J Bacteriol. 2005 Aug;187(15):5075-83.

8.

Enhanced expression of Rhizobium etli cbb₃ oxidase improves drought tolerance of common bean symbiotic nitrogen fixation.

Talbi C, Sánchez C, Hidalgo-Garcia A, González EM, Arrese-Igor C, Girard L, Bedmar EJ, Delgado MJ.

J Exp Bot. 2012 Sep;63(14):5035-43. doi: 10.1093/jxb/ers101. Epub 2012 Apr 17.

PMID:
22511804
9.

The Rhizobium etli opt operon is required for symbiosis and stress resistance.

Vos K, Braeken K, Fauvart M, Ndayizeye M, Verhaert J, Zachurzok S, Lambrichts I, Michiels J.

Environ Microbiol. 2007 Jul;9(7):1665-74.

PMID:
17564602
10.

Glutathione is required by Rhizobium etli for glutamine utilization and symbiotic effectiveness.

Taté R, Cermola M, Riccio A, Diez-Roux G, Patriarca EJ.

Mol Plant Microbe Interact. 2012 Mar;25(3):331-40. doi: 10.1094/MPMI-06-11-0163.

11.

Altered lipid A structures and polymyxin hypersensitivity of Rhizobium etli mutants lacking the LpxE and LpxF phosphatases.

Ingram BO, Sohlenkamp C, Geiger O, Raetz CR.

Biochim Biophys Acta. 2010 May;1801(5):593-604. doi: 10.1016/j.bbalip.2010.02.001. Epub 2010 Feb 11.

12.

Regulatory role of Rhizobium etli CNPAF512 fnrN during symbiosis.

Moris M, Dombrecht B, Xi C, Vanderleyden J, Michiels J.

Appl Environ Microbiol. 2004 Mar;70(3):1287-96.

13.

Metabolomics and systems pharmacology: why and how to model the human metabolic network for drug discovery.

Kell DB, Goodacre R.

Drug Discov Today. 2014 Feb;19(2):171-82. doi: 10.1016/j.drudis.2013.07.014. Epub 2013 Jul 26. Review. Erratum in: Drug Discov Today. 2014 Nov;19(11):1828.

14.

Role of trehalose in heat and desiccation tolerance in the soil bacterium Rhizobium etli.

Reina-Bueno M, Argandoña M, Nieto JJ, Hidalgo-García A, Iglesias-Guerra F, Delgado MJ, Vargas C.

BMC Microbiol. 2012 Sep 17;12:207. doi: 10.1186/1471-2180-12-207.

15.

A comparative transcriptome analysis of Rhizobium etli bacteroids: specific gene expression during symbiotic nongrowth.

Vercruysse M, Fauvart M, Beullens S, Braeken K, Cloots L, Engelen K, Marchal K, Michiels J.

Mol Plant Microbe Interact. 2011 Dec;24(12):1553-61. doi: 10.1094/MPMI-05-11-0140.

16.
17.

Regulation and symbiotic role of nirK and norC expression in Rhizobium etli.

Gómez-Hernández N, Reyes-González A, Sánchez C, Mora Y, Delgado MJ, Girard L.

Mol Plant Microbe Interact. 2011 Feb;24(2):233-45. doi: 10.1094/MPMI-07-10-0173.

18.

Prediction of metabolic fluxes by incorporating genomic context and flux-converging pattern analyses.

Park JM, Kim TY, Lee SY.

Proc Natl Acad Sci U S A. 2010 Aug 17;107(33):14931-6. doi: 10.1073/pnas.1003740107. Epub 2010 Aug 2.

19.

Sulphadimethoxine inhibits Phaseolus vulgaris root growth and development of N-fixing nodules.

Sartorius M, Riccio A, Cermola M, Casoria P, Patriarca EJ, Taté R.

Chemosphere. 2009 Jul;76(3):306-12. doi: 10.1016/j.chemosphere.2009.03.067. Epub 2009 May 6.

PMID:
19423149
20.

Only one catalase, katG, is detectable in Rhizobium etli, and is encoded along with the regulator OxyR on a plasmid replicon.

Vargas Mdel C, Encarnación S, Dávalos A, Reyes-Pérez A, Mora Y, García-de los Santos A, Brom S, Mora J.

Microbiology. 2003 May;149(Pt 5):1165-76.

PMID:
12724378

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