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Transcriptomic analysis of postmortem brain identifies dysregulated splicing events in novel candidate genes for schizophrenia.

Cohen OS, Mccoy SY, Middleton FA, Bialosuknia S, Zhang-James Y, Liu L, Tsuang MT, Faraone SV, Glatt SJ.

Schizophr Res. 2012 Dec;142(1-3):188-99. doi: 10.1016/j.schres.2012.09.015. Epub 2012 Oct 9.


Variations in myelin and oligodendrocyte-related gene expression across multiple brain regions in schizophrenia: a gene ontology study.

Katsel P, Davis KL, Haroutunian V.

Schizophr Res. 2005 Nov 15;79(2-3):157-73. Epub 2005 Sep 1.


Comparison of Affymetrix Gene Array with the Exon Array shows potential application for detection of transcript isoform variation.

Ha KCh, Coulombe-Huntington J, Majewski J.

BMC Genomics. 2009 Nov 12;10:519. doi: 10.1186/1471-2164-10-519.


Variations in differential gene expression patterns across multiple brain regions in schizophrenia.

Katsel P, Davis KL, Gorman JM, Haroutunian V.

Schizophr Res. 2005 Sep 15;77(2-3):241-52.


Alternative splicing and differential gene expression in colon cancer detected by a whole genome exon array.

Gardina PJ, Clark TA, Shimada B, Staples MK, Yang Q, Veitch J, Schweitzer A, Awad T, Sugnet C, Dee S, Davies C, Williams A, Turpaz Y.

BMC Genomics. 2006 Dec 27;7:325.


Identification and expression analysis of splice variants of mouse enabled homologue during development and in adult tissues.

Veniere S, Waterschoot D, Vandekerckhove J, Lambrechts A, Ampe C.

BMC Mol Biol. 2010 Jun 17;11:45. doi: 10.1186/1471-2199-11-45.


Alternatively Spliced Genes as Biomarkers for Schizophrenia, Bipolar Disorder and Psychosis: A Blood-Based Spliceome-Profiling Exploratory Study.

Glatt SJ, Chandler SD, Bousman CA, Chana G, Lucero GR, Tatro E, May T, Lohr JB, Kremen WS, Everall IP, Tsuang MT.

Curr Pharmacogenomics Person Med. 2009 Sep;7(3):164-188.


Transcriptomic analysis of autistic brain reveals convergent molecular pathology.

Voineagu I, Wang X, Johnston P, Lowe JK, Tian Y, Horvath S, Mill J, Cantor RM, Blencowe BJ, Geschwind DH.

Nature. 2011 May 25;474(7351):380-4. doi: 10.1038/nature10110.


Implementation of exon arrays: alternative splicing during T-cell proliferation as determined by whole genome analysis.

Whistler T, Chiang CF, Lonergan W, Hollier M, Unger ER.

BMC Genomics. 2010 Sep 14;11:496. doi: 10.1186/1471-2164-11-496.


A statistical method for predicting splice variants between two groups of samples using GeneChip expression array data.

Fan W, Khalid N, Hallahan AR, Olson JM, Zhao LP.

Theor Biol Med Model. 2006 Apr 7;3:19.


Transcriptome sequencing revealed significant alteration of cortical promoter usage and splicing in schizophrenia.

Wu JQ, Wang X, Beveridge NJ, Tooney PA, Scott RJ, Carr VJ, Cairns MJ.

PLoS One. 2012;7(4):e36351. doi: 10.1371/journal.pone.0036351. Epub 2012 Apr 27.


A statistical framework for genome-wide discovery of biomarker splice variations with GeneChip Human Exon 1.0 ST Arrays.

Yoshida R, Numata K, Imoto S, Nagasaki M, Doi A, Ueno K, Miyano S.

Genome Inform. 2006;17(1):88-99.


Shared gene expression alterations in schizophrenia and bipolar disorder.

Shao L, Vawter MP.

Biol Psychiatry. 2008 Jul 15;64(2):89-97. doi: 10.1016/j.biopsych.2007.11.010. Epub 2008 Jan 11.


The long non-coding RNA Gomafu is acutely regulated in response to neuronal activation and involved in schizophrenia-associated alternative splicing.

Barry G, Briggs JA, Vanichkina DP, Poth EM, Beveridge NJ, Ratnu VS, Nayler SP, Nones K, Hu J, Bredy TW, Nakagawa S, Rigo F, Taft RJ, Cairns MJ, Blackshaw S, Wolvetang EJ, Mattick JS.

Mol Psychiatry. 2014 Apr;19(4):486-94. doi: 10.1038/mp.2013.45. Epub 2013 Apr 30.


Aberrant regulation of alternative pre-mRNA splicing in schizophrenia.

Morikawa T, Manabe T.

Neurochem Int. 2010 Dec;57(7):691-704. doi: 10.1016/j.neuint.2010.08.012. Epub 2010 Sep 9. Review.


Disease-associated intronic variants in the ErbB4 gene are related to altered ErbB4 splice-variant expression in the brain in schizophrenia.

Law AJ, Kleinman JE, Weinberger DR, Weickert CS.

Hum Mol Genet. 2007 Jan 15;16(2):129-41. Epub 2006 Dec 12.


MADS+: discovery of differential splicing events from Affymetrix exon junction array data.

Shen S, Warzecha CC, Carstens RP, Xing Y.

Bioinformatics. 2010 Jan 15;26(2):268-9. doi: 10.1093/bioinformatics/btp643. Epub 2009 Nov 17.


Re-analysis of bipolar disorder and schizophrenia gene expression complements the Kraepelinian dichotomy.

Qian K, Di Lieto A, Corander J, Auvinen P, Greco D.

Adv Exp Med Biol. 2012;736:563-77. doi: 10.1007/978-1-4419-7210-1_33.


Exon-level transcriptome profiling in murine breast cancer reveals splicing changes specific to tumors with different metastatic abilities.

Bemmo A, Dias C, Rose AA, Russo C, Siegel P, Majewski J.

PLoS One. 2010 Aug 6;5(8):e11981. doi: 10.1371/journal.pone.0011981.

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