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Items: 1 to 20 of 140

1.

Energetic studies on DNA-peptide interaction in relation to the enthalpy-entropy compensation paradox.

Yang RC, Huang JT, Chien SC, Huang R, Jeng KC, Chen YC, Liao M, Wu JR, Hung WK, Hung CC, Chen YL, Waring MJ, Sheh L.

Org Biomol Chem. 2013 Jan 7;11(1):48-61. doi: 10.1039/c2ob26320c.

PMID:
23051861
2.

Novel DNA-peptide interaction networks.

Huang JT, Chen YC, Chang JC, Jeng KC, Kao KK, Yang RC, Kan LS, Wey MT, Waring MJ, Chen CS, Chien WJ, Sheh L.

Bioorg Med Chem. 2010 Apr 1;18(7):2575-85. doi: 10.1016/j.bmc.2010.02.047. Epub 2010 Mar 2.

PMID:
20338768
3.

The contribution of DNA single-stranded order to the thermodynamics of duplex formation.

Vesnaver G, Breslauer KJ.

Proc Natl Acad Sci U S A. 1991 May 1;88(9):3569-73.

4.

Detection of multiple network-based allosteric interactions between peptides and arrays of DNA binding sites.

Kao KK, Huang JC, Yang CK, Jeng KC, Chang JC, Yao WC, Hsien SC, Waring MJ, Chen MH, Ma L, Sheh L.

Bioorg Med Chem. 2010 Jan 1;18(1):366-76. doi: 10.1016/j.bmc.2009.10.048. Epub 2009 Oct 31.

PMID:
19926483
7.

The energetics of HMG box interactions with DNA: thermodynamics of the DNA binding of the HMG box from mouse sox-5.

Privalov PL, Jelesarov I, Read CM, Dragan AI, Crane-Robinson C.

J Mol Biol. 1999 Dec 10;294(4):997-1013.

PMID:
10588902
8.

Energetics of lesion recognition by a DNA repair protein: thermodynamic characterization of formamidopyrimidine-glycosylase (Fpg) interactions with damaged DNA duplexes.

Minetti CA, Remeta DP, Zharkov DO, Plum GE, Johnson F, Grollman AP, Breslauer KJ.

J Mol Biol. 2003 May 16;328(5):1047-60.

PMID:
12729740
9.
10.

Apparent thermodynamic parameters of ligand binding to the cloned rat mu-opioid receptor.

Li JG, Raffa RB, Cheung P, Tzeng TB, Liu-Chen LY.

Eur J Pharmacol. 1998 Aug 7;354(2-3):227-37.

PMID:
9754924
11.

Energetic basis of molecular recognition in a DNA aptamer.

Bishop GR, Ren J, Polander BC, Jeanfreau BD, Trent JO, Chaires JB.

Biophys Chem. 2007 Mar;126(1-3):165-75. Epub 2006 Aug 17.

PMID:
16914261
12.

Binding of antibacterial magainin peptides to electrically neutral membranes: thermodynamics and structure.

Wieprecht T, Beyermann M, Seelig J.

Biochemistry. 1999 Aug 10;38(32):10377-87.

PMID:
10441132
13.

Enthalpy-driven nuclease-like activity and mechanism of peptide-chlorambucil conjugates.

Yang RC, Huang JT, Chen YL, Hung CC, Liao M, Yao WC, Chen CH, Liou CC, Waring MJ, Sheh L.

Org Biomol Chem. 2014 Jul 21;12(27):4890-904. doi: 10.1039/c4ob00123k.

PMID:
24874710
14.

Binding of netropsin to several DNA constructs: evidence for at least two different 1:1 complexes formed from an -AATT-containing ds-DNA construct and a single minor groove binding ligand.

Freyer MW, Buscaglia R, Cashman D, Hyslop S, Wilson WD, Chaires JB, Lewis EA.

Biophys Chem. 2007 Mar;126(1-3):186-96. Epub 2006 Jun 22.

PMID:
16837123
15.

Length dependence of the coil <--> beta-sheet transition in a membrane environment.

Meier M, Seelig J.

J Am Chem Soc. 2008 Jan 23;130(3):1017-24. doi: 10.1021/ja077231r. Epub 2007 Dec 29.

PMID:
18163629
16.

Structural and thermodynamic strategies for site-specific DNA binding proteins.

Jen-Jacobson L, Engler LE, Jacobson LA.

Structure. 2000 Oct 15;8(10):1015-23. Erratum in: Structure Fold Des 2000 Dec 15;8(12):following 251..

17.

Salt bridge exchange binding mechanism between streptavidin and its DNA aptamer--thermodynamics and spectroscopic evidences.

Kuo TC, Lee PC, Tsai CW, Chen WY.

J Mol Recognit. 2013 Mar;26(3):149-59. doi: 10.1002/jmr.2260.

PMID:
23345105
18.

Thermodynamic and hydration effects for the incorporation of a cationic 3-aminopropyl chain into DNA.

Soto AM, Kankia BI, Dande P, Gold B, Marky LA.

Nucleic Acids Res. 2002 Jul 15;30(14):3171-80.

19.

Comparative thermodynamics for monomer and dimer sequence-dependent binding of a heterocyclic dication in the DNA minor groove.

Wang L, Kumar A, Boykin DW, Bailly C, Wilson WD.

J Mol Biol. 2002 Mar 29;317(3):361-74.

PMID:
11922670
20.

Interaction of a designed interleukin-10 epitope mimic with an antibody studied by isothermal titration microcalorimetry.

Welfle K, Misselwitz R, Sabat R, Volk HD, Schneider-Mergener J, Reineke U, Welfle H.

J Mol Recognit. 2001 Mar-Apr;14(2):89-98.

PMID:
11301479

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