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Items: 1 to 20 of 199

1.

Oxygen minimum zones harbour novel viral communities with low diversity.

Cassman N, Prieto-Davó A, Walsh K, Silva GG, Angly F, Akhter S, Barott K, Busch J, McDole T, Haggerty JM, Willner D, Alarcón G, Ulloa O, DeLong EF, Dutilh BE, Rohwer F, Dinsdale EA.

Environ Microbiol. 2012 Nov;14(11):3043-65. doi: 10.1111/j.1462-2920.2012.02891.x. Epub 2012 Oct 5.

PMID:
23039259
2.

Microbial community phylogenetic and trait diversity declines with depth in a marine oxygen minimum zone.

Bryant JA, Stewart FJ, Eppley JM, DeLong EF.

Ecology. 2012 Jul;93(7):1659-73.

PMID:
22919912
3.

Bacterial diversity in the oxygen minimum zone of the eastern tropical South Pacific.

Stevens H, Ulloa O.

Environ Microbiol. 2008 May;10(5):1244-59. doi: 10.1111/j.1462-2920.2007.01539.x. Epub 2008 Feb 18.

PMID:
18294206
4.

Microbial metatranscriptomics in a permanent marine oxygen minimum zone.

Stewart FJ, Ulloa O, DeLong EF.

Environ Microbiol. 2012 Jan;14(1):23-40. doi: 10.1111/j.1462-2920.2010.02400.x. Epub 2011 Jan 7.

PMID:
21210935
5.
6.

Microbial eukaryote diversity in the marine oxygen minimum zone off northern Chile.

Parris DJ, Ganesh S, Edgcomb VP, DeLong EF, Stewart FJ.

Front Microbiol. 2014 Oct 28;5:543. doi: 10.3389/fmicb.2014.00543. eCollection 2014.

7.

Environmental factors determining ammonia-oxidizing organism distribution and diversity in marine environments.

Bouskill NJ, Eveillard D, Chien D, Jayakumar A, Ward BB.

Environ Microbiol. 2012 Mar;14(3):714-29. doi: 10.1111/j.1462-2920.2011.02623.x. Epub 2011 Nov 3.

PMID:
22050634
8.

Size-fractionated diversity of eukaryotic microbial communities in the Eastern Tropical North Pacific oxygen minimum zone.

Duret MT, Pachiadaki MG, Stewart FJ, Sarode N, Christaki U, Monchy S, Srivastava A, Edgcomb VP.

FEMS Microbiol Ecol. 2015 May;91(5). pii: fiv037. doi: 10.1093/femsec/fiv037. Epub 2015 Apr 1.

PMID:
25873468
9.

Metagenomic analysis of size-fractionated picoplankton in a marine oxygen minimum zone.

Ganesh S, Parris DJ, DeLong EF, Stewart FJ.

ISME J. 2014 Jan;8(1):187-211. doi: 10.1038/ismej.2013.144. Epub 2013 Sep 12.

10.

Community composition of ammonia-oxidizing archaea from surface and anoxic depths of oceanic oxygen minimum zones.

Peng X, Jayakumar A, Ward BB.

Front Microbiol. 2013 Jul 1;4:177. doi: 10.3389/fmicb.2013.00177. eCollection 2013.

11.

Denitrification as the dominant nitrogen loss process in the Arabian Sea.

Ward BB, Devol AH, Rich JJ, Chang BX, Bulow SE, Naik H, Pratihary A, Jayakumar A.

Nature. 2009 Sep 3;461(7260):78-81. doi: 10.1038/nature08276.

PMID:
19727197
12.

Denitrifying bacterial community composition changes associated with stages of denitrification in oxygen minimum zones.

Jayakumar A, O'Mullan GD, Naqvi SW, Ward BB.

Microb Ecol. 2009 Aug;58(2):350-62. doi: 10.1007/s00248-009-9487-y. Epub 2009 Feb 24.

PMID:
19238477
13.

Vertical partitioning of nitrogen-loss processes across the oxic-anoxic interface of an oceanic oxygen minimum zone.

De Brabandere L, Canfield DE, Dalsgaard T, Friederich GE, Revsbech NP, Ulloa O, Thamdrup B.

Environ Microbiol. 2014 Oct;16(10):3041-54. doi: 10.1111/1462-2920.12255. Epub 2013 Sep 30.

PMID:
24118779
14.

The marine viromes of four oceanic regions.

Angly FE, Felts B, Breitbart M, Salamon P, Edwards RA, Carlson C, Chan AM, Haynes M, Kelley S, Liu H, Mahaffy JM, Mueller JE, Nulton J, Olson R, Parsons R, Rayhawk S, Suttle CA, Rohwer F.

PLoS Biol. 2006 Nov;4(11):e368.

15.

Biodiversity and biogeography of phages in modern stromatolites and thrombolites.

Desnues C, Rodriguez-Brito B, Rayhawk S, Kelley S, Tran T, Haynes M, Liu H, Furlan M, Wegley L, Chau B, Ruan Y, Hall D, Angly FE, Edwards RA, Li L, Thurber RV, Reid RP, Siefert J, Souza V, Valentine DL, Swan BK, Breitbart M, Rohwer F.

Nature. 2008 Mar 20;452(7185):340-3. doi: 10.1038/nature06735. Epub 2008 Mar 2.

PMID:
18311127
16.

A microdiversity study of anammox bacteria reveals a novel Candidatus Scalindua phylotype in marine oxygen minimum zones.

Woebken D, Lam P, Kuypers MM, Naqvi SW, Kartal B, Strous M, Jetten MS, Fuchs BM, Amann R.

Environ Microbiol. 2008 Nov;10(11):3106-19. doi: 10.1111/j.1462-2920.2008.01640.x. Epub 2008 May 27. Erratum in: Environ Microbiol. 2010 Aug;12(8):2384.

PMID:
18510553
17.

Revising the nitrogen cycle in the Peruvian oxygen minimum zone.

Lam P, Lavik G, Jensen MM, van de Vossenberg J, Schmid M, Woebken D, Gutiérrez D, Amann R, Jetten MS, Kuypers MM.

Proc Natl Acad Sci U S A. 2009 Mar 24;106(12):4752-7. doi: 10.1073/pnas.0812444106. Epub 2009 Mar 2.

18.

Communities of nirS-type denitrifiers in the water column of the oxygen minimum zone in the eastern South Pacific.

Castro-González M, Braker G, Farías L, Ulloa O.

Environ Microbiol. 2005 Sep;7(9):1298-306.

PMID:
16104853
19.

Deoxygenation alters bacterial diversity and community composition in the ocean's largest oxygen minimum zone.

Beman JM, Carolan MT.

Nat Commun. 2013;4:2705. doi: 10.1038/ncomms3705.

PMID:
24162368
20.

Ocean plankton. Patterns and ecological drivers of ocean viral communities.

Brum JR, Ignacio-Espinoza JC, Roux S, Doulcier G, Acinas SG, Alberti A, Chaffron S, Cruaud C, de Vargas C, Gasol JM, Gorsky G, Gregory AC, Guidi L, Hingamp P, Iudicone D, Not F, Ogata H, Pesant S, Poulos BT, Schwenck SM, Speich S, Dimier C, Kandels-Lewis S, Picheral M, Searson S; Tara Oceans Coordinators, Bork P, Bowler C, Sunagawa S, Wincker P, Karsenti E, Sullivan MB.

Science. 2015 May 22;348(6237):1261498. doi: 10.1126/science.1261498. Erratum in: Science. 2016 Aug 12;353(6300). pii: aah6502. doi: 10.1126/science.aah6502.

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